Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0535 ATGAACAACTGGGAATTGATGGAGCTGGCTGCTGCAAGCAAGGGGCTTTCCTCTATTATTCATATTGATCTTGGATACTTTAGTAAAAACTTGATTCATTTAGATTCATTGTGTGTATTTCCACCTAAGAGTGTAAAGCAGAGAAACCCTTTGCCATCCAACCCTGGATCAACTCAGGAACAGACATCATTGGCAACCTTCTCATGGTATGATTCTAGACTGTTGGGTGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAAGATATTGAAGATGTTACAAGGACACCTTCTACAGGATTGGGGTTGAACCAGAATGGTGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGGAAGGAGCATACTAGTTTTGTCTGAGACCGTTGACTCTGAAAAGGTTCTCTTTATCATGTTCTTAGGCATATGCATGGGGCTTGACATACGAAATTGGCAGAAGAACCTAAATCAATTGACATGGCCAGAAATTTTCCGACAGTTAGCACTGTCTGCAGGATTAGGACCGCGGCTGAAGAAAAGAAATATTACATGGTCATATGTAATTGATAAAGATGAGGGAAAGAGTTGCAAAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCCGAAAGTGCTGTGACCAAAATGCAAGAGAGAGGTCTGTTAGCTCCTCGAAGATCAAGGCACCGATTAACTCCTGGAACAGTTAAATTTGCAGCTTTTCATGTTCTCTCTCTAAGCTGGAGGGTAAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGCTGCTTTGACAAGAGACACTAAATTGTTTGAAAGAATAGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAGAATCCTGCTGATGCTGACTCCATTCTTTCAGAAGCAAGGAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCAGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGATGATGATTTAGTAAATCCTTCAAGTGCAAACCAAAATTCTGAACAGTATGATGACTCAAACATTTGCTCATCAAATGGAAAAGAAAATTTGGGTCACAATTTCTACCTTGTTTTCCTAAGAATGGTTCTAAGGTTGCTGGATTGTCCCAGTCCTGTCACCAGACATCCTGTTGCTTGTGAAGATTTAAATGCTGGCAATCATGATCAAGATAATATGGAAATTGATGAAAGCAAATCTGGAGAGTCCTGGATTCTAGGGCTCGCTGAAGGAGAATATTCTGATCTCAGCGTAGAAGAGCGCTCTAAACGCTCTTGTTGTGAACGACTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAGATAGATAAACATCACCCAGCACTGCAGAAAACCAAAAGGAGCTGTAGCACAGAGCATGCCTATGGAGAAGTCCTCAGTCAATTCAAGATTTTTCCACAGGTACCGGTGCAGACACCCTCAGACTCAGGTACCTGCACAATATTCAAAAAGATCACGTTCACAATTGAAATCTTATATGGCCCACCTATCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCCCGCAGGATCTTTGTTGAATATCATGATGGCATGTGGAGGCTTATTGATTCTGAAGAGGCTGATCAACTAAATTGTACATTGATCATTGATGTTGGCATGATTGCATGTTGTGCCAAAAATGGAAGCAGAAGTGAAGTTTCTATTAAAATTGAAGCTAGCGAAACATGTTCTATCCCTGACCACAATGCTGGATCTGACAGTCCTAGCAGTATCCTTCATGATTTGAACACTGATCCATCTGAAACTTCGCCATCCTTCAAAATTGATCTTGGGAAAACTGAGAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGTTGTGGAAAGAATGCTATAATTCATCGACTCCCATTGCAATTCCTGCCACCGGAATTTCCCCTCAAATACCAAGATTGCTTAAGGTCCTGTTGGCTTGTATGGAGGTATCTGTTCTATCTGAAGCATTTGAAACAAATTGGACGATGATATTAGGAAGCACTGGGATATTGACCCTATTTGAGAGATCACTACGGCGGGATTTTCTGTCATTGAACTTCTCTACGACAGATGAATTGTTGAGATCAAGCAATATGTCAGAAAGTTCTGTGCAGGCTTCAACTGATCCTGAATCTGTTGCTGTGCTTCCATGGGTTCCACTGACGACTGCAGCTTTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTATAAGCTTCCATCAAGATATACTCACATGAAATCTAATAGGGAGGTTGAACCAGCAGAATTTGTCTATGATGAATTCACTAAAGATAAATTTGTTCCTAAGAAAATTGTACGAAGTGGCAATAAACGTGGGTCGGGGTACTAA 2538 0.4129 MNNWELMELAAASKGLSSIIHIDLGYFSKNLIHLDSLCVFPPKSVKQRNPLPSNPGSTQEQTSLATFSWYDSRLLGEIHVALLKVIIKDIEDVTRTPSTGLGLNQNGAANPGGGHPEIVGRSILVLSETVDSEKVLFIMFLGICMGLDIRNWQKNLNQLTWPEIFRQLALSAGLGPRLKKRNITWSYVIDKDEGKSCKDIISTLRNGSAAESAVTKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLSWRVKSGLRDLTTSKTPEASISAALTRDTKLFERIAPSTYCVRDAFRKNPADADSILSEARKKIQIFENGFLAGEDADDVEREESESDEVDEDPEDDDLVNPSSANQNSEQYDDSNICSSNGKENLGHNFYLVFLRMVLRLLDCPSPVTRHPVACEDLNAGNHDQDNMEIDESKSGESWILGLAEGEYSDLSVEERSKRSCCERLESANALKKQMWAEAQIDKHHPALQKTKRSCSTEHAYGEVLSQFKIFPQVPVQTPSDSGTCTIFKKITFTIEILYGPPIRGDVCLQVFTPWPRSQTNRYWQFVASASSNDPGSRRIFVEYHDGMWRLIDSEEADQLNCTLIIDVGMIACCAKNGSRSEVSIKIEASETCSIPDHNAGSDSPSSILHDLNTDPSETSPSFKIDLGKTESEKKAALRRYQDFQKWLWKECYNSSTPIAIPATGISPQIPRLLKVLLACMEVSVLSEAFETNWTMILGSTGILTLFERSLRRDFLSLNFSTTDELLRSSNMSESSVQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYKLPSRYTHMKSNREVEPAEFVYDEFTKDKFVPKKIVRSGNKRGSGY 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0535 845 PANTHER HOMEOBOX DOMAIN PROTEIN 698 844 - -
Aed9g0535 845 PANTHER HOMEOBOX DOMAIN PROTEIN 4 61 - -
Aed9g0535 845 PANTHER HOMEOBOX DOMAIN PROTEIN 546 688 - -
Aed9g0535 845 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 66 471 IPR044977 GO:0006357
Aed9g0535 845 PANTHER HOMEOBOX DOMAIN PROTEIN 66 471 - -
Aed9g0535 845 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 698 844 IPR044977 GO:0006357
Aed9g0535 845 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 4 61 IPR044977 GO:0006357
Aed9g0535 845 MobiDBLite consensus disorder prediction 623 650 - -
Aed9g0535 845 Pfam HB1, ASXL, restriction endonuclease HTH domain 252 291 IPR007759 GO:0006355
Aed9g0535 845 MobiDBLite consensus disorder prediction 322 366 - -
Aed9g0535 845 MobiDBLite consensus disorder prediction 347 366 - -
Aed9g0535 845 MobiDBLite consensus disorder prediction 324 346 - -
Aed9g0535 845 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 546 688 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0535 Aed-Chr9 3713945 3718987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0535 693 799 Homeobox Transcription Factor Family AT5G44180 42.623 7.14e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0535 - - gmx:100818817 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0535 9 3713945 3718987 Aed9g0535 9 3713945 3718987 ECH