Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0530 ATGGGGATGGACTACTTTGGGATTTTGGAGGTTGACAGGAATGCCACAGATGAAGAGTTGAAGAAGGCCTACAGAAAGCTTGCAATGAAATGGCACCCTGATAAGAACCCAAACAACAAGAAAGTGGCTGAGATTCAATTTAAACAGATATCTGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAATTTACGATCGGTATGGAGAAGGTGGCCTTAAAGGTGGAGTGCCAACACCGGATGAAGGAGTGGCTTCCTTCTTCCGAACTGGGGATGGCCCAACAGCATTTAGGTTCAATCCCAGAAATGCAAACAACATTTTTGCAGAAGTTTTTGGGTGTTCAAGCCCATCATTTGGAGGAACGGGAATGGGATTTGGCTGCGGTGGCAGTGGCGGGGGCAGAGGTAGAGGCATGGGGGGCATGGGGGGCGGATCATGGGTGTCTAGGTCCTTTGGTGGAATGTTTGGCAATGGCACGTTTAGAGAAGGCAGGCCAATGAATCAAGGTCCACGCCGCAAGGCACCTCCTGTTGAAAATACATTGTTTTGCAGCCTTGAGGAGCTATACAAGGGGAGTACCAGAAAGATGAAAATCTCAAGGGAAATTACACATGCAAGCGGGAGAATTTTTCTTGTGGAGGAAATATTAAACATTGAAATCCATCCGGGCTGGAAAAAAGGAACCAAAATCACTTTCCCAGAGAAAGGAAATGAGCAGCCAAATGTGATTGCTGCAGATCTTGTGTTTATTATTGATGAGAAACCTCACAGTGTATTTACAAGAGATGGTAATGATTTGATTGTGACACAAAAGATATCACTTACAGAAGCTGAAGCTCTAACAGGCTACACAGTCCAACTTACAACTCTAGATTGCAGGGGTCTAAACGTTGTCATAAACAATGTGACTGATTCAGATTATGAAGAAGTGGTCACCGGGGAAGGTATGCCAATATCCAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAATTCAACATCAAAATCCCAACATAA 1023 0.4457 MGMDYFGILEVDRNATDEELKKAYRKLAMKWHPDKNPNNKKVAEIQFKQISEAYEVLSDPQKRAIYDRYGEGGLKGGVPTPDEGVASFFRTGDGPTAFRFNPRNANNIFAEVFGCSSPSFGGTGMGFGCGGSGGGRGRGMGGMGGGSWVSRSFGGMFGNGTFREGRPMNQGPRRKAPPVENTLFCSLEELYKGSTRKMKISREITHASGRIFLVEEILNIEIHPGWKKGTKITFPEKGNEQPNVIAADLVFIIDEKPHSVFTRDGNDLIVTQKISLTEAEALTGYTVQLTTLDCRGLNVVINNVTDSDYEEVVTGEGMPISKDPSKKGNLRIKFNIKIPT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0530 340 CDD DnaJ 4 59 IPR001623 -
Aed9g0530 340 Gene3D DnaJ domain 2 122 IPR036869 -
Aed9g0530 340 Gene3D - 178 256 - -
Aed9g0530 340 CDD DnaJ_C 177 340 - -
Aed9g0530 340 Pfam DnaJ domain 4 67 IPR001623 -
Aed9g0530 340 SMART dnaj_3 3 62 IPR001623 -
Aed9g0530 340 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aed9g0530 340 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aed9g0530 340 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aed9g0530 340 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aed9g0530 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 173 269 IPR008971 GO:0006457|GO:0051082
Aed9g0530 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 260 340 IPR008971 GO:0006457|GO:0051082
Aed9g0530 340 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aed9g0530 340 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aed9g0530 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 340 - -
Aed9g0530 340 Pfam DnaJ C terminal domain 180 339 IPR002939 -
Aed9g0530 340 SUPERFAMILY Chaperone J-domain 3 99 IPR036869 -
Aed9g0530 340 Gene3D - 258 340 - -
Aed9g0530 340 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0530 Aed-Chr9 3654585 3658426 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0530 5 69 C2H2 Transcription Factor Family AT1G74250 36.232 7.20e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0530 K09510 - gmx:100794650 587.415