Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0529 ATGGAGGACGAGCCAGAGAACAACGCAGTGAAGAGAGAAGAAACCAGCAATGAGAACGAAAACAACAACAACAACAACAACAATGAAAGTAACAGCAAATTTGGAAATTCGAGTGAGGGTCACAGCAAGCCCAAGCGTCAGATGAAGACGCCGTTTCAGCTTGAAACGCTCGAGAAAGCTTATGCCGTTGAGAATTACCCGTCGGAGACTATGAGGGCGGAGTTGTCGGAGAAGTTGGGGTTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTTGCCGTCGAAGAAGCCGCGTAAGGCGGCAGCGTTGCCGGATTCTCCGGTGGAGGAGCTCAAGCTGCTGCCTGAAGTGGGTGTGGAATACGGATCCGGGTCGGGTTCAGGATCCAGCCCGTTGACCCGCTCTGAGTTGAGGAATGTGGTGTCTCGGGGGTACTATGACTCGCCACAGACTATAATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTGAGGGAAGATGGACCTATTCTTGGAGTGGAGTTTGATCCATTGCCACCGGATGCATTTGGGGCACCCTTAGCTGTTACGGAACCGCAGAAGCGGCCTAGTGTTGCCTATGACAGTAAAATATATGAAAGACATGATGTTAGGACAAATACGGCAATAGCAAGGACATTCCATGAATATCCTTTTCTTCCAAACCAGTCTGGCATTAGATCTGATGTTTATGGACAACTGAACCTACCTCATTTACATGATCCAATGGAGGGTCCTACCAGAACTCCTTTCCCCCCTGGAAATGAACAGCAACCCAGAATTCATGCTCCCCAAAGTCATTCTTCTCGTGTTCGCCTTTTGTCTCAGCAGCAGGACAAGCAAGTGATTCCTTATCCATCTCCTCCTCGAGACAATGTCGTTGCACCCAAAAGGGAACCTCACACAAACATAACCAATACTGGAATGAATTCCCACTTTCCTGATCACCCAATTGTTGGGCAAGAAAATCCTTATACTTTACCTGGTGGGCAAGTTTCCCATAACGATGCAGTATTGAGGATGGAGAGGAAACGAAAGAGTGATGAAGCCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATGAGGATGCGGAAAGAGCTTGAGAAACAAGATAACCTCAGACGAAAGAGTGAAGAGCGATTGAAGAAAGAAATGGAAAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAAACTGCGAGAAGAGGAAAGATCAAGGCGTGAGCAAAGACGGGAAATCGAACGAAGGGAAAAGTTTTTGTTGAAAGAACATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGGTCCGCAAAGAGAAAGAGGAAGAGAGGAGGAAAACTGCCCTTGAGAAGGCAAATGCTCGGAGAATAGCTAAAGAATCTATGGAGCTTATCGAGGATGAACAACTGGAATTGATGGAGTTGGCTGCTGCAAGCAAGGGGCTTTCCTCTATTATTCATATTGATCTTGATACTTTGCAAAACCTTGATTCATTTAGGGATTCATTGTGTGTATTTCCACCCAAGAGTGTAAAGCAGAGAAAACCCTTTGCCATCCAACCCTGGATCAACTCAGAACAGAATATTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGATTTATGGCCTTTTACTCTTGATGAGTTTGTACAGTCATTTCATGACTATGATTCTAGACTGTTGGGTGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAAGATATTGAAGATGTTGCAAGGACACCTTCTACAGGATTGGGGTTGAACCAGAATGGTGCTGCTAATCCTGGAGGTGGCCATCCAGAGATTGTGGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACCTAAATCAATTGACATGGCCAGAAATTTTCCGACAGTTAGCACTGTCTGCAGGATTAGGACCGCGGCTGAAGAAAAGAAATATTACATGGTCATATGTAATTGATAAAGATGAGGGAAAGAGTTGCAAAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCCGAAAGTGCTGTGACCAAAATGCAAGAGAGAGGTCTGTTAGCTCCTCGAAGATCAAGGCACCGATTAACTCCTGGAACAGTTAAATTTGCAGCTTTTCATGTTCTCTCGCTGGAGGGTAGTAAGGGTTTGACAGTACTTGAGCTCGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGACACTAAATTGTTTGAAAGAATAGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAGAATCCTGCTGATGCTGACTCCATTCTTTCAGAAGCAAGGAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCAGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGATGATGATTTAGTAAATCCTTCAAGTGCAAACCAAAATTCTGAACAGTATGATGACTCAAACATTTGCTCATCAAATGGAAAAGAAAATTTGGGTCACAATGTAGATCTTATTCAAAATGAGTTTAATACAGTTCTACCTTGTTTTCCTAAGAATGGTTCGAAGGTTGCTGATTGTCCCAGTCCTGTCACCAGACATCCTGTTGCTTGTGAAGATTTAAATGCTGGCAATCATGATCAAGATAATATGGAAATTGATGAAAGCAAATCTGGAGAGTCCTGGATTCTAGGGCTCGCTGAAGGAGAATATTCTGATCTCAGCGTAGAAGAGCGTCTAAACGCTCTTGTTGTGTTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGAACGACTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAGATAGATAAAGTACGTCTAAAAGATGATAATATTAGTAAATTAGATTTTCCATCACTTACTGGGAATAAAGTTGAAACACCATACACTTATCCAGCTGTGGAGGGAAACCAAAGCCCAATGCTTGACATTAATATTAACAATATTAATAATGAAGCATCACCCAGCACTGCAGAAAACCAAAAAGGAGCTGTAGCACAGAGCATGCCTATGGAGAAGTCCTCGTCAATTCAAGATTTTTCCACAGGTACCGGTGCAGACACCCCTCAGACTCAGGTACCTGCACAATATTCAAAAAGATCACGTTCACAATTGAAATCTTATATGGCCCACCTATCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCCGGCAGGATCTTTGTTGAATATCATGATGGCATGTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTGACATCATTGGATTCACGGGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAATTCCTTTAAAGAAAATGTTCGAAACAGGATTGCATGTTGTGCCAAAAATGGAAGCAGAAGTGAAGTTTCTATTAAAATTGAAGCTAGCGAAACATGTTCTATCCCTGACCACAATGCTGGATCTGACAGTCCTAGCAGTATCCTTCATGATTTGAACACTGATCCATCTGAAACTTCGCCATCCTTCAAAATTGATCTTGGGAAAACTGAGAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGTTGTGGAAAGAATGCTATAATTCATCGGTTTTATGTGCAATGAAATATGGGATAAAGAGATGCAAACCTCAGATGGACATTTGTGATATCTGTCTCAATCTTTATTTTGTTGAAGACTCCCATTGCAATTCCTGCCACCGGAATTTCCCCTCAAATAGTGGATTTAATTTTTCTAAACATGCATTTCAATGTCGAGACAAGTTATCCAAAGATAATTGTGTTTTCGAATATTCTCTTCCCTTGCAGCCAAGATTGCTTAAGGTCCTGTTGGCTTGTATGGAGGTATCTGTTCTATCTGAAGCATTTGAAACAAATTGGAACGATGATATTAGGAAGCACTGGGGTGTAAAGTTGAGCAAATCATCTTCTGTCGAGGAACTTTTACAGATATTGACCCTATTTGAGAGATCACTACGGCGGGATTTTCTGTCATCGAACTTCTCTACGACAGATGAATTGTTGAGATCAAGCAATATGTCAGAAAGTTCTGTGCAGGCTTCAACTGATCCTGAATCTGTTGCTGTGCTTCCATGGGTTCCACTGACGACTGCAGCTTTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCTTGAAAGACTTGAGCCTTGTGGGGAGAAAGAAGCAAGAGAATACATAAAGCTTCCATCAAGATATACTCACATGAAATCTAATAGGGAGGTTGAACCAGCAGAATTTGTCTATGATGAATTCACTAAAGATAAATTTGTTCCTAAGAAAATTGTACGAAGTGGCAATAAACGTGGTCGGGGTACTAATGAACAAGGACGGGGTAAAAAGATGGCTAAAAGAGTGTGCAATTCCAAACAAAATGGTGGTCGCAAGAATGCTAAGGTCACTGACAATCTAAGTCACAAATTAAAACAGCAGGCATGTGGAACACAAGGACAAGGTGCTGGGCGAGGTCGCCGAACAGTAAGGAAGCGGAGAATGGGTAAGAGAGCTGTTGAAGATTTGTTGTTGGGCCATACGACAGCCAGTCATAGCTTCAAGATTGATGGAGAACCATTGGGAAACTTGGATGAGGAATGGGATGGAGAAAAGGCAAGTCCCATGACTCCTGTACACATTGGGGTTGCTGCTGACAATAGTAACAGTGCCGAAGAGGTGGAATCTGATGATGACAATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTAGGTTTTAATGGTGTTCCCCCCAACAGATGGAGTAGGGATTTGGTTGGAATAAGTGACGAAGATGTGGACGCTTTTGAAGATGATAATGACAATGACAATGGCATTGAAGAGGAGGATTCAGAAGCAGATGTTATGAGTGATGGTTCAGATGGGATGGCAAATAGGATAGTAAATGTTGGAGGCTCAGACTCGGCTTTGTCTGAAGACTCTTCTGATTAG 5265 0.4281 MEDEPENNAVKREETSNENENNNNNNNNESNSKFGNSSEGHSKPKRQMKTPFQLETLEKAYAVENYPSETMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPRKAAALPDSPVEELKLLPEVGVEYGSGSGSGSSPLTRSELRNVVSRGYYDSPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVTEPQKRPSVAYDSKIYERHDVRTNTAIARTFHEYPFLPNQSGIRSDVYGQLNLPHLHDPMEGPTRTPFPPGNEQQPRIHAPQSHSSRVRLLSQQQDKQVIPYPSPPRDNVVAPKREPHTNITNTGMNSHFPDHPIVGQENPYTLPGGQVSHNDAVLRMERKRKSDEARVAKEVEAYEMRMRKELEKQDNLRRKSEERLKKEMERQDRERRKEEERLMREKLREEERSRREQRREIERREKFLLKEHLRAEKRRQKEEVRKEKEEERRKTALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLDSFRDSLCVFPPKSVKQRKPFAIQPWINSEQNIGNLLMVWRFLITFADVLDLWPFTLDEFVQSFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGLNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGLGPRLKKRNITWSYVIDKDEGKSCKDIISTLRNGSAAESAVTKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKNPADADSILSEARKKIQIFENGFLAGEDADDVEREESESDEVDEDPEDDDLVNPSSANQNSEQYDDSNICSSNGKENLGHNVDLIQNEFNTVLPCFPKNGSKVADCPSPVTRHPVACEDLNAGNHDQDNMEIDESKSGESWILGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEERLESANALKKQMWAEAQIDKVRLKDDNISKLDFPSLTGNKVETPYTYPAVEGNQSPMLDININNINNEASPSTAENQKGAVAQSMPMEKSSSIQDFSTGTGADTPQTQVPAQYSKRSRSQLKSYMAHLSEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDGMWRLIDSEEAFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRNRIACCAKNGSRSEVSIKIEASETCSIPDHNAGSDSPSSILHDLNTDPSETSPSFKIDLGKTESEKKAALRRYQDFQKWLWKECYNSSVLCAMKYGIKRCKPQMDICDICLNLYFVEDSHCNSCHRNFPSNSGFNFSKHAFQCRDKLSKDNCVFEYSLPLQPRLLKVLLACMEVSVLSEAFETNWNDDIRKHWGVKLSKSSSVEELLQILTLFERSLRRDFLSSNFSTTDELLRSSNMSESSVQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYVKLERLEPCGEKEAREYIKLPSRYTHMKSNREVEPAEFVYDEFTKDKFVPKKIVRSGNKRGRGTNEQGRGKKMAKRVCNSKQNGGRKNAKVTDNLSHKLKQQACGTQGQGAGRGRRTVRKRRMGKRAVEDLLLGHTTASHSFKIDGEPLGNLDEEWDGEKASPMTPVHIGVAADNSNSAEEVESDDDNAQAVEYDQGNWEVGFNGVPPNRWSRDLVGISDEDVDAFEDDNDNDNGIEEEDSEADVMSDGSDGMANRIVNVGGSDSALSEDSSD 1754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1701 1754 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 259 291 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 834 856 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1537 1603 - -
Aed9g0529 1754 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 12 1754 IPR044977 GO:0006357
Aed9g0529 1754 Coils Coil 447 482 - -
Aed9g0529 1754 ProSiteProfiles 'Homeobox' domain profile. 40 100 IPR001356 GO:0003677
Aed9g0529 1754 SMART HOX_1 42 104 IPR001356 GO:0003677
Aed9g0529 1754 Pfam HB1, ASXL, restriction endonuclease HTH domain 733 801 IPR007759 GO:0006355
Aed9g0529 1754 MobiDBLite consensus disorder prediction 832 878 - -
Aed9g0529 1754 Pfam DDT domain 553 607 IPR018501 -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1 18 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1 51 - -
Aed9g0529 1754 SMART testlast3 551 610 IPR018501 -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 390 417 - -
Aed9g0529 1754 Pfam Homeodomain 43 99 IPR001356 GO:0003677
Aed9g0529 1754 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1122 1194 IPR028941 -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1562 1589 - -
Aed9g0529 1754 Coils Coil 376 441 - -
Aed9g0529 1754 ProSiteProfiles HARE-type HTH domain profile. 733 802 IPR007759 GO:0006355
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1231 1255 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1052 1102 - -
Aed9g0529 1754 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 942 985 IPR028942 -
Aed9g0529 1754 Gene3D - 26 101 - -
Aed9g0529 1754 PANTHER HOMEOBOX DOMAIN PROTEIN 12 1754 - -
Aed9g0529 1754 CDD homeodomain 45 99 IPR001356 GO:0003677
Aed9g0529 1754 ProSiteProfiles DDT domain profile. 551 610 IPR018501 -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 1702 1727 - -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 19 38 - -
Aed9g0529 1754 SUPERFAMILY Homeodomain-like 32 99 IPR009057 -
Aed9g0529 1754 MobiDBLite consensus disorder prediction 857 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0529 Aed-Chr9 3643690 3654263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0529 36 1685 Homeobox Transcription Factor Family AT1G28420 48.236 0.0 1313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed9g0529 WSD 7.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0529 - - gmx:100777465 2956.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1854 10 22946735 22957782 Aed9g0529 9 3643690 3654263 PCT