Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0528 ATGACATGGTGCAATGAGTCTGATGAGGATAGGGGCATTGAATCAATCACGCCAACAATAACTATTATTACTCCTAACACTCATCACATAAAACTCACCCAAGAAGTTAGGACCGTAACATGCCCCTCGTGCGGCCATACCATTGAATTCGAGGATCATCATCAGGGTGGAATTCTTGAGTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGATCCGAATGACCAAGAAATATTACAACATTTAGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAGAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGAGTTAGCAAAGATGGACAGATCCGGCACTTCTTTCACAGGCCTTCAAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGACGAAGGAAGTGAAACAAGATGGCACAAAACCGGAAAAACTAGAGCAGTTTTTGCAGCTGGTAGTGCAGATGTAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGGAAAAAGAAGCCTGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGAAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTATTTCAAAGGTCTTCTATCAGACTCAACCTAGGCAATGTGGTAATCCCATTATCATAAAGGATCCGTACGAAAAAATGTTGATTGATGGAAGTGGCCAAGACAACAACAACACATCAATGCCTAAAACTACTGCAACTTTTGTGGATTGCTACAATGTTCCTTACATAAATTATGATCATGTCCATGTGACTCATAATAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCACTTACCAATGGATGCAAAGAAAGCAAGATTTGACTGA 957 0.4096 MTWCNESDEDRGIESITPTITIITPNTHHIKLTQEVRTVTCPSCGHTIEFEDHHQGGILELPGLPAGVKFDPNDQEILQHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAGSADVVKGFKKILVLYTNYGRKKKPEKTNWVMHQYHLGSTEEEKDGELVISKVFYQTQPRQCGNPIIIKDPYEKMLIDGSGQDNNNTSMPKTTATFVDCYNVPYINYDHVHVTHNRESSSQLIIPSSVVQVDGSYIHLPMDAKKARFD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0528 318 Gene3D NAC domain 73 230 IPR036093 GO:0003677|GO:0006355
Aed9g0528 318 Pfam No apical meristem (NAM) protein 65 207 IPR003441 GO:0003677|GO:0006355
Aed9g0528 318 ProSiteProfiles NAC domain profile. 64 226 IPR003441 GO:0003677|GO:0006355
Aed9g0528 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 304 - -
Aed9g0528 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 304 IPR044799 GO:0003700
Aed9g0528 318 SUPERFAMILY NAC domain 58 226 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0528 Aed-Chr9 3622924 3626484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0528 1 316 NAC Transcription Factor Family AT1G28470 55.988 8.93e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed9g0528 NAM 5.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0528 - - gmx:100809389 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0528 9 3622924 3626484 Aed9g0528 9 3622924 3626484 ECH