Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0525 ATGTTCAGGATTTTCCGGTCACTGCTTATGATATTCCACCCCATGTGTTCTGTCGTGTCCTTGATGTCAAGCTCCATATGTGATTGTGCTTTTTCTGGGCAGGCAGAGGAAGGGAGCGATGAAGTGTATTGCCAAGTGTTGTTGGTTCCTGAAAGTGAGCAACTGGAGCAAGGCTTGCGTGAAGGGGAAATTGATGCTGATGGGGAAGAGGAGGATACTGAAGCTATTGTAAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACTCATGGTGGATTCTCAGTGCCCCGTCGAGCAGCTGAAGATTGCTTTCCTCCCCTGGATTACAATCAACAGAGACCTTCACAGGAGCTTGTGGCAAAGGATCTTTATGGCCTGGAATGGAGGGGCGATGATGGAGAACTGAGATTAGGGATTCGTAGGGCAGCTCAGTTGAAAAGTGCTGGTTCCTTTGCAGTTCCATCTGGCCAGCAATTGAATCCTTCAACTCTCATGGATGTTGTTAATGCATTATCTACAAGATGTGCATTCAGTGTTTGCTACAATCCAAGGTTTAGCTCATCGGAATTCATCATACCTGTTCACAAATTCTTAAAGAGCCTTGATTGTTCTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCAGCAGAGCAAAGATTCACTGGATTAATTGCTGGAATTAGTGATGTCGATCCTGTTAGATGGCCCGGATCAAAATGGAGGTGCCTACTGGTGAGGTGGGATGACATAGAAGCTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCAAATTCCAGTAACTTAATGGCAGCTGGTTTGAAGAGGTCCAGGATTGGAATGACTTCAGCAAAGCTGGAATTTCCCACTCCCAATGGGATTGGAACATCAGACTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATACTCCCTTTGATGGTATTAATGCTCAGAGTCCCCGGTTATATGAGTTAGGGAGATGCTATCCTGGTTCAAACTATTCTGGGATTCCTCCAACAGGAAATAACATCAGAATGCCTCATCTGGCATCTGATTTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGAAGAGCCTTGTCGATTGAGGAGGCTCGAGCTAATGGTCGCTTTGGACATTTTGATGGTTATCAGTTGCTCAATTCCAGAAATGGATGGTCTGCACAGATGCATGACAACGCTCCACATTTGCATGCATCTGTCACACCTGCACAAGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTTACTCCAGTTTCAAACTGTGATTACAATAACAAACGTAATAAGGAAATGGAGGGTAGAGTCCATTACCAAGGTTTATACACATCTGAAGTGAAAGGTAGAACATTTGCATCATCTTCCCCATCTGATGATCTTTATTTCTCTAGGCGAGCTCCAGAAGGTGCTAGTTCTTTAGGTATGTTTGATGTTCATAATAATCAGTTGGGTAGTTCACGACCACATGAATCAGCAGCATTGAGAAGCAACCAAGAGTTGGTTTCCTCATGTAAAAATAGTTGCAGACTCTTTGGTTTTTCATTGACTGAGGACACGCATGTTGCAAATAAAGAGGCTGATGCCTCTACCATCACTTTACCATTGAATGCTGGACCTTCCTTTACCAGTTGGAAGTAA 1803 0.4415 MFRIFRSLLMIFHPMCSVVSLMSSSICDCAFSGQAEEGSDEVYCQVLLVPESEQLEQGLREGEIDADGEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLYGLEWRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPSTLMDVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAEQRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAARHNRVSPWEIEPSGSASNSSNLMAAGLKRSRIGMTSAKLEFPTPNGIGTSDFGESLRFRKVLQGQEILGVNTPFDGINAQSPRLYELGRCYPGSNYSGIPPTGNNIRMPHLASDFSCNGIGFSESFRFQKVLQGQEILPSQPYGRALSIEEARANGRFGHFDGYQLLNSRNGWSAQMHDNAPHLHASVTPAQVSSPSSVLMFQQAVTPVSNCDYNNKRNKEMEGRVHYQGLYTSEVKGRTFASSSPSDDLYFSRRAPEGASSLGMFDVHNNQLGSSRPHESAALRSNQELVSSCKNSCRLFGFSLTEDTHVANKEADASTITLPLNAGPSFTSWK 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0525 600 Gene3D - 83 139 IPR015300 -
Aed9g0525 600 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 136 585 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed9g0525 600 PANTHER AUXIN RESPONSE FACTOR 136 585 - -
Aed9g0525 600 CDD B3_DNA 83 136 IPR003340 GO:0003677
Aed9g0525 600 PANTHER AUXIN RESPONSE FACTOR 34 136 - -
Aed9g0525 600 Pfam Auxin response factor 175 255 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aed9g0525 600 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 34 136 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed9g0525 600 Gene3D - 211 285 - -
Aed9g0525 600 SUPERFAMILY DNA-binding pseudobarrel domain 78 136 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0525 Aed-Chr9 3597205 3603018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0525 84 405 B3 DNA Binding Superfamily AT2G33860 49.448 4.81e-109 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0525 K14486 - gmx:100789906 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0525 9 3597205 3603018 Aed9g0525 9 3597205 3603018 ECH