Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0508 ATGGATATTCATACTAATCATGGTGCAACTTCTGAAGGGATTCTTGAGAATGTGTGGGCCAAAGTTATGAGCAGTGATGGAAGAAAAGGTGATGCAGCAGAATCTTCTAACCCTTGGGAAGAACTTCCTAACCTTGATGGAAGAGAAGGGTCCAAGGAAATCCTACAAAGGCTTCCAAGTTTAGGAAGGTGGATATCAATGGGAGCTGATTTCTGGGAACAAGTTTTAGATGGTATTGTTCTACCTAACACAAGCAACAACAATTTGGAAATTGGAAGTGCTGATATTGAATCCAATAACAAGGTGGAAGATGGTGTAAGAATAGATCAGAAGGCAGTTACAAAACACTACAGGGGAGTTAGGAGAAGGCCATGGGGTAAATATGCTGCAGAGATTAGAGACTCTTCCAAAAAAGGTGCTAGAGTTTGGCTTGGAACATTTGACACTGCTGAAGAAGCAGCTTTGGCTTATGACAAGGCTGCTTTGAGGATTAGAGGTCCTAAGGCGTACCTTAATTTCCCACTTGAGAGGGTTACAAATGCTTTAGGATATTGTTGTGGTGACCACAAAGGAACTCATCTTGCTTGCACATGCATAGGGAACAAAGAAAATTTGATCAACTCCAGAAAGAGAGGATCAAGGGAAAGGGAAGTATTTGATGATAATGAACAACCTGCGACAAAAAAGTTGGAATGCATGGTAGAAAATGAACTAGGTGCTTTTGTATTTCAGGACCTAGGAAGTGATTACTTGGACAGTTTACTGTCTTCTTTTTGA 777 0.408 MDIHTNHGATSEGILENVWAKVMSSDGRKGDAAESSNPWEELPNLDGREGSKEILQRLPSLGRWISMGADFWEQVLDGIVLPNTSNNNLEIGSADIESNNKVEDGVRIDQKAVTKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLERVTNALGYCCGDHKGTHLACTCIGNKENLINSRKRGSREREVFDDNEQPATKKLECMVENELGAFVFQDLGSDYLDSLLSSF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0508 258 Pfam AP2 domain 116 166 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 Gene3D AP2/ERF domain 115 176 IPR036955 GO:0003700|GO:0006355
Aed9g0508 258 SMART rav1_2 116 180 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 SUPERFAMILY DNA-binding domain 116 175 IPR016177 GO:0003677
Aed9g0508 258 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 ProSiteProfiles AP2/ERF domain profile. 116 174 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 258 - -
Aed9g0508 258 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 16 258 - -
Aed9g0508 258 CDD AP2 115 174 IPR001471 GO:0003700|GO:0006355
Aed9g0508 258 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0508 Aed-Chr9 3514814 3515590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0508 14 258 AP2-EREBP Transcription Factor Family AT4G18450 38.562 1.25e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed9g0508 AP2 2.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0508 - - gmx:100820226 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0508 9 3514814 3515590 Aed9g0508 9 3514814 3515590 ECH