Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0504 ATGAATTTTCATGCACAAACTTCCAAAGCACTTTTAAATCTTTTGCTTGGGCCTTTTCTATCAGTCTTGATTCTCCTATTCAAGTTCCTTATTGGAGCTCAGGTTGCCTACAGCTTTCAAAATACAAGTGTTGGTGTAGTCGTCGATATCAAATCAGTGGCTGGAAAACAACAGAGAAGAGCCATGCAAATTGCAGCTCTAACTTTCAATAATTATTCAAAGAATCGTAACATCAACCTTTTCTTCAGCGACTCAGGTGGAATCCCTTTACAAGCAGCTTCAGCTGCTGATGAACTAATCATGAAGAAGAAAGTTGAAGTAATTGTTGGCATGGGGACATGGCAAGAAGCAGCTCTAGTTGCTGACCTTGGAAACAAAGCTCAAATACCAATTATTTCATTTGCTTCTCCCCCAATAGTCCCTCCTTTAATGCAACATCGTTGGCCTTTTTTGATTCAAATGGCTAAAGATCAGGCTGCACACATGAACTGCATTGCAGATATTATCCATGTGTACAACTGGCACCAGGTTATAGCTATATATGAAGACAACCCTTATAGTGGTGATTCTGGATTGTTGGGCCTCTTTTCCGAGGCTCTCAAAAAGAGTAACGCGCAGATTGAGAACCTATTAGTTCTTCCATCGTTCACTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAATTGCTTAAGCTGTTGCCACTAAACTCTCGTGTCTTTGTTGTACTTCAAGCATCATTCCCTATGGTAATTCATTTGTTCAGAGAAGCTAAGAAAATTGGATTCTTGGAGAAAGATTCAGCTTGGATAATCAACGAGGGGATCACAAGTATGTTGGACTATGCAAATAAATCTGTTTTATCCTCTATGGAAGGTATTTTGGGAATCAAAACCTACTATTCTACAAATTCTACTGCTTATACTCATTTGCAGCAAAATTTCCAATCTGAGAATACTGAAACAGAAGTCTCTAAACCGGGATCAGATGCATTACGAGCTTATGATAGCGTTACAATCATTTCAAAGGCATTGGAGAAAATAAATAGCAAATCTAGTAACTCAAGGGTGTTCTTGGAGAAAATGTTATCTAGCAATTTCACTGGTTTAAGTGGTAATATAACATTCAAAGAAAGTCATCTATCCAACACTCCAGTATTGAGAGTCATAAATGTGGTTAATAAGGAATACAGGGAATTGAACTTTGGGACCCCAAAATTGAAGTTCGCTAGATCTCTTGAAATACTGAAAGACAGAGACAAAAGGGGTGATTTTGCTACAAACAACATAACTGGCACAGTGGTTTGGCCAGGAGGTCTAATTTCTGCTGATCCTAAGGGATGGAAAATGCCTACCGACAAAGAACCTTTAAAAGTGGCAATTCCTATAAACCCAGCATTTGATCTTTTTTTGAAGAAAGACTCCCAAGGGAATTATATTGGTTTCTGTATTGATCTTTTCCATGAGGCACGAAAAATTCTGAGTGACAAGTATTCTGGGATGCCTTATGTGTTTCACCCCTTCAATGAATCCTATGATAATCTTCTACTGAATATCGTAAACAAGTCCCATGATGTTATTGTAGGAGATGTAACAATACTTTCCGAACGATCAAAGGATGTGTGGTTCACTCAGCCATACACTGAGTCAGGCTTATCACTTATTCTTCCAATAGAGACTGAAGGGTCAGCATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGATCGCAACAATTGGAATCCTCATCTACACAGTGTTTATCATATGGTTCCTGGAGCATCACTTGAATCCAGATTTTGGTGGACCATTGAAAAATCAGATCAGCACCACGCTGTGGTTTGCTTTTACTTCTCTATTTTTTGCTCATAAGGAGAAAATAAACAGCAACTCTGCCCGAGTAGTAGTTGGAGTTTGGCTATTTCTAGTGTTTGTTTTAACCTCAAGCTACACTGCCAACCTTTCGTCAATGCTTACTGTGAAACGATTGCAGTCTGGAAGAGATATTGAGTGGCTAAAGCAAAACAATTTATCAGTTGGTTGTGATACCGGCTCCTTTGTAAAGAGCTACATCACAAGAGTCAAAAAAATATCTGCGCTCTTTCTTGAGAGCCCGTATGAGAAGGTTTTCTTGAATAAGTACTGCAAGGATTACACTGCAATTACAGCTTCCAGTAAATTTGGAGGACTGGGCTTTGTATTTCAAAAAGGATCTCCCATGGCAAGAGACTTCTCTGGAGTCATTTTAAAGCTAGCAGAAAAAGGAACACTGAAAAATATGGAAGAGTATTGGTTGACCCCTCCTTCCAAAGAATGCTCCAACTCAACATCTCCAGAAACTGAGAGCCTGACCCTCGACAACTTTTGGGAAAAAGCTCAACTTGAACTTCAAGGCAATGTGACTGCTAATGATGACAGTGTTTGGAAGAAGGCAATTAGAATCAATACAGGCTTTTACAATAATGTCAATAACAAAACTTTAGGTAGAGCTGCAACTTTTGGTGGAACACAATTTACACGTCGTTGGAATTCCTCAAGGTGGGAGAGAATCCAAGAGTCGACATACAAAACAAAGAAAAATACAATTGAGGCACAGGATTACAAAACAAACTGTTGTGTTAGCAAAACAAATGGAAATACCGGCGTGAAGGCACGATATCAAGCTTTTGTTAAGTTTATAGCCTTTCCAGTTTCCACGAATAACATCAGTAGTTGGCTTTGGCTCTTTAACTCTTCCAATGTGCTTAAACAGAACCGTTAA 2763 0.3891 MNFHAQTSKALLNLLLGPFLSVLILLFKFLIGAQVAYSFQNTSVGVVVDIKSVAGKQQRRAMQIAALTFNNYSKNRNINLFFSDSGGIPLQAASAADELIMKKKVEVIVGMGTWQEAALVADLGNKAQIPIISFASPPIVPPLMQHRWPFLIQMAKDQAAHMNCIADIIHVYNWHQVIAIYEDNPYSGDSGLLGLFSEALKKSNAQIENLLVLPSFTSLSDPKGFVLDELLKLLPLNSRVFVVLQASFPMVIHLFREAKKIGFLEKDSAWIINEGITSMLDYANKSVLSSMEGILGIKTYYSTNSTAYTHLQQNFQSENTETEVSKPGSDALRAYDSVTIISKALEKINSKSSNSRVFLEKMLSSNFTGLSGNITFKESHLSNTPVLRVINVVNKEYRELNFGTPKLKFARSLEILKDRDKRGDFATNNITGTVVWPGGLISADPKGWKMPTDKEPLKVAIPINPAFDLFLKKDSQGNYIGFCIDLFHEARKILSDKYSGMPYVFHPFNESYDNLLLNIVNKSHDVIVGDVTILSERSKDVWFTQPYTESGLSLILPIETEGSAWLFMKPFSWEMWIATIGILIYTVFIIWFLEHHLNPDFGGPLKNQISTTLWFAFTSLFFAHKEKINSNSARVVVGVWLFLVFVLTSSYTANLSSMLTVKRLQSGRDIEWLKQNNLSVGCDTGSFVKSYITRVKKISALFLESPYEKVFLNKYCKDYTAITASSKFGGLGFVFQKGSPMARDFSGVILKLAEKGTLKNMEEYWLTPPSKECSNSTSPETESLTLDNFWEKAQLELQGNVTANDDSVWKKAIRINTGFYNNVNNKTLGRAATFGGTQFTRRWNSSRWERIQESTYKTKKNTIEAQDYKTNCCVSKTNGNTGVKARYQAFVKFIAFPVSTNNISSWLWLFNSSNVLKQNR 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0504 920 Gene3D - 565 700 - -
Aed9g0504 920 Pfam Ligand-gated ion channel 768 790 IPR001320 GO:0015276|GO:0016020
Aed9g0504 920 CDD PBP1_GABAb_receptor_plant 43 413 IPR044440 -
Aed9g0504 920 Pfam Receptor family ligand binding region 59 393 IPR001828 -
Aed9g0504 920 PIRSF IGluLR_plant 12 699 IPR017103 -
Aed9g0504 920 PIRSF IGluLR_plant 694 791 IPR017103 -
Aed9g0504 920 Pfam Bacterial extracellular solute-binding proteins, family 3 473 767 IPR001638 -
Aed9g0504 920 SMART GluR_14 456 768 IPR001320 GO:0015276|GO:0016020
Aed9g0504 920 PANTHER GLUTAMATE RECEPTOR 2 695 - -
Aed9g0504 920 PANTHER GLUTAMATE RECEPTOR 695 791 - -
Aed9g0504 920 SUPERFAMILY Periplasmic binding protein-like I 44 401 IPR028082 -
Aed9g0504 920 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 695 791 - -
Aed9g0504 920 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 695 - -
Aed9g0504 920 Gene3D - 161 322 - -
Aed9g0504 920 Gene3D - 40 160 - -
Aed9g0504 920 Gene3D - 451 564 - -
Aed9g0504 920 SUPERFAMILY Periplasmic binding protein-like II 434 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0504 Aed-Chr9 3492416 3496779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0504 44 790 Ion Channels AT2G29120 32.593 2.74e-116 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0504 - - gmx:112997619 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0504 9 3492416 3496779 Aed9g0504 9 3492416 3496779 ECH