Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0501 ATGGGTTCTAAAGACAAAGATGACGAGGAGTCACTTGGTGTAGGCCTTCAGGTGCTGCTAGCAGCAGCTTTTTCTTTATTTGGTATGATCTTGTTAATTATAATCTTCCATTTTGTTGTAAAATGTTTCATTAGACGCCAACAAAGGAGACGCCAAAACGACCTTCTTTATCAAATCCGCACTCAAATTGCACCAATTGATGTGAGTTCTGTGATGCCACGCAACTCTGGCCTCGACCCTTTGGTCATAGCCTCTCTGCCTAAACTCTTGTACAAGCAAACGGAGAAGTTCAAGCAAGGTGAAGTTATAGAGTGCTCGGTTTGTTTAGGCACTATTGTGGAAGATGCAATTACTAGGGTGCTACCAAATTGTAAGCACGTTTTTCATGTTGATTGTGTTGATAAATGGTTTAATTCTAACACCACATGCCCAATTTGCCGCACCGTGGTTGAACCAAAGGTGAAACCGGTTCAACCCACAGCGCCACCGGCTGAGGGTGGTGGTGATGAATTGGAGAGGGTGGGGTGTTCAGGATTGAGAATAGGGTCTTTCCATAGGATGGTTAGTAACAGGGAAAGACCAGGGAGAAGGACTCAGAGCTGTGATGGATCTACCATATCAGATATAGAAAGCCACTAA 639 0.4413 MGSKDKDDEESLGVGLQVLLAAAFSLFGMILLIIIFHFVVKCFIRRQQRRRQNDLLYQIRTQIAPIDVSSVMPRNSGLDPLVIASLPKLLYKQTEKFKQGEVIECSVCLGTIVEDAITRVLPNCKHVFHVDCVDKWFNSNTTCPICRTVVEPKVKPVQPTAPPAEGGGDELERVGCSGLRIGSFHRMVSNRERPGRRTQSCDGSTISDIESH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0501 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 153 IPR013083 -
Aed9g0501 212 SUPERFAMILY RING/U-box 90 154 - -
Aed9g0501 212 MobiDBLite consensus disorder prediction 188 212 - -
Aed9g0501 212 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Aed9g0501 212 SMART ring_2 105 146 IPR001841 -
Aed9g0501 212 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 210 - -
Aed9g0501 212 Pfam Ring finger domain 104 147 IPR001841 -
Aed9g0501 212 PANTHER RING FINGER DOMAIN-CONTAINING 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0501 Aed-Chr9 3473019 3473657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0501 1 212 C3H Transcription Factor Family AT2G42360 30.769 1.12e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0501 K19038 - gmx:100786701 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0501 9 3473019 3473657 Aed9g0501 9 3473019 3473657 ECH