Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0480 ATGTCAACTACTTCATCATCATCATCATCATCTTCTATTTGGGCGTTGTCTAACATAAAGCTTCAGTTCTTTGCCCGCATAAGAAGGTTTCTCCAATCCAAAGCAAGCAGAAAGCGTTGTGACTCCTCTGATCGGTTTGACACAGACAAGAGCAGAGTTGAAAACAACAAAAAGGCTGAAAATCTTGAAACTGTTCAAGTTGTGGAGAAACATAAAGAGGAGGAAGAGACTGCAATCATGTTGCAAAAAACTGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGGTAGCAGCAAAGGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTAAGAAAATTGATAACAGAACTTGGGGTGGTGCCGGTTTTGGTAACTATGGCGGCTTCGCCGGTGGCTAGCAGCCGGCGAGCAGGGTTAGCAGCGTTGATCAACCTAGCTGATGGAACTTACACGAACAAGGCTTTGATAGTGGAGGCAGGAATATTGTCGAAGCTGCCTAAGACAATTGATCTTGTAGATGAATCAACAACAAGTAAATTGGCAGAGTTGCTCTTGTCATTGTCATCTCTAGCAAACACTCAATTCCCTCTTGCTTCATTAGACTTTCTCCCATTACTTAGAAACATTCTTGAGACAGGCTCAAGTTTTGACACCAAAGGATCATGTTTGGGTGCATTGCATAACCTATCAACTGTGTTAGAGAATGCATGCCCTTTGGTTTCAAGTGGGGTGGTCCCTATCCTCTTGGAAATGTCTTCAATAAAGGAAATTTCAGAGAAAGCACTTGCCACTCTGGGGAACTTGTCAGTGACTTTGATGGGAAAGAAAGCAATAGAGAACAATTCAATGGTGCCAGAAACCTTTATTGAGATCTTATCATGGGAAGACAAACCCAAATGTCAAGAATTGTCAGTGTATATTTTGATGATTCTAGCACATCAAAGCTCATTGCAGAGGAAGAAAATGGCACAGGCTGGGATTGTTCCTGTGCTTCTTGAAGTGGCTTTATTGGGAAGCACTTTGGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAGAGGCAAACAAGGATGGGTCCACACTCCGGTCCACAAACACCAAGATTTGCAATGGGGTCACCAGTTAATCAAAGAGAAGCAAAAGAAGGGAAGAGATTGATGAACAGTTTGGTGAAACAAAGTTTGCATAGGAATATGGAAATAATAACACAGAGGGCAAATGCAGCAGGGGACTCTTCTAAATTGAAGTCTTTGATTATTAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1308 0.4182 MSTTSSSSSSSSIWALSNIKLQFFARIRRFLQSKASRKRCDSSDRFDTDKSRVENNKKAENLETVQVVEKHKEEEETAIMLQKTVKMLHFGSWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVTMAASPVASSRRAGLAALINLADGTYTNKALIVEAGILSKLPKTIDLVDESTTSKLAELLLSLSSLANTQFPLASLDFLPLLRNILETGSSFDTKGSCLGALHNLSTVLENACPLVSSGVVPILLEMSSIKEISEKALATLGNLSVTLMGKKAIENNSMVPETFIEILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVALLGSTLAQKRAMKLLQWFKDERQTRMGPHSGPQTPRFAMGSPVNQREAKEGKRLMNSLVKQSLHRNMEIITQRANAAGDSSKLKSLIISTSSKSLPY 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0480 435 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 70 435 - -
Aed9g0480 435 SMART arm_5 110 150 IPR000225 GO:0005515
Aed9g0480 435 SMART arm_5 235 273 IPR000225 GO:0005515
Aed9g0480 435 SMART arm_5 193 234 IPR000225 GO:0005515
Aed9g0480 435 SMART arm_5 152 192 IPR000225 GO:0005515
Aed9g0480 435 Gene3D - 56 413 IPR011989 -
Aed9g0480 435 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 70 435 - -
Aed9g0480 435 SUPERFAMILY ARM repeat 85 354 IPR016024 -
Aed9g0480 435 MobiDBLite consensus disorder prediction 362 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0480 Aed-Chr9 3352873 3356337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0480 94 373 U-box Gene Family AT1G67530 30.556 2.89e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0480 - - gmx:100819002 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0480 9 3352873 3356337 Aed9g0480 9 3352873 3356337 ECH