LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0476	ATGCCGGACTTCCACGACTCCCTCACGCCGCCGCCGTCCCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCGCCACACTCGTCGATTCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTTGCCGACGCCGTCAACGCGCTCCACGGCCACACCAAAAAGACGCACCGCACCGACGTCCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGGCTTCCAACGGTACTCTCTCTTCCCCTTGGCCTTTCTACGACCGATTGGACACTCTAATCGGCCCTAATTTTAGCGCGAAGAAACCAACCTCTTCGCCCTCTCCGTCGCCGCCGGTGGCTCTTCCGTTGCTGCCGCATCGGAAGAGCCTGAACCCTTCCTCTTCTCCTGCGATTTCGGTGCCGCCGACGGCCCTAGCCAAGTGGGCGAGAAGAGAAGGTGCTGGAAAGGTTGTCATGCTTTGGTCTAGTGATGTCATGGGAAAGTACATATCTTCAGCTGATATACTGTGA	576	0.599	MPDFHDSLTPPPSRPVPVREDCWSEEASATLVDSWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGTLSSPWPFYDRLDTLIGPNFSAKKPTSSPSPSPPVALPLLPHRKSLNPSSSPAISVPPTALAKWARREGAGKVVMLWSSDVMGKYISSADIL	191

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0476	191	PANTHER	TRIHELIX TRANSCRIPTION FACTOR ASIL2	7	161	IPR044823	-
	Aed9g0476	191	Pfam	Myb/SANT-like DNA-binding domain	20	114	IPR044822	-
	Aed9g0476	191	PANTHER	OS05G0560600 PROTEIN	7	161	-	-
	Aed9g0476	191	MobiDBLite	consensus disorder prediction	119	153	-	-
	Aed9g0476	191	Gene3D	-	23	89	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0476	Aed-Chr9	3306438	3310466	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g0476	19	135	Trihelix Transcription Factor Family	AT3G14180	55.556	1.19e-37	133

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Aed9g0476		Myb_DNA-bind_4	8.8e-24	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0476	-		-	gmx:100815241	297.36

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed9g0476	9	3306438	3310466	Aed9g0476	9	3306438	3310466	ECH