Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0467 ATGGAAATGAGATGGAACACTTTTGGATTTTGTCTAAGAATTTATATTTGCTTAATCTTTGTGTGGGGCATTCGAGATTGTTGGTCCCTTAATGATGAAGGGATGGCTTTGTTAGCGTTTCGAGCAAGAATAACTTCTGATCCCTTAAATGCTTTGGTGAATTGGAATCCCAATGATTGTGACCCTTGCAAGTGGTTGGGTGTTCATTGTGTAGATGGTAAAGTGCAAATGATGGAGTTAAAAGGGTTATCTTTGGAAGGGACACTAGCTCCTGAGCTCGGCAAACTTAGTCACCTAAATTCTCTTGTGTTATGCAAGAATAATTTTTTTGGTGCCATTCCCAAAGAACTTGGAGATTTACCCAAGCTAGAGTTATTGGATTTAAGAGAGAATAACTTGTCAGGAAGAATCCCAACAGAAATTGGCAAGATGTCATTACTAAAACATTTTGTGTGGAAAAGCAACTTCAAACAATGGAACAAATCATATTCATTGGTTATTCTAACTAAAGCAACACTTCTGAAATGTCTCAATGCTTTTGCGTTGCCACTATTCAAGTTAGGAAAGTCAACCTTTCATGGCCATGAAAAGGATTATTGTGACCTTCTGCTTAGTTCTAATGTGCCAGAGATTGCTCAGAATGTACCAGAACTTGTGAATTCTGCACGTCGTAAGTTACTTCAGTCCAATGGCAATAACCTTGCTGCTGCACCTTTTAGTGGTGAACCAACTATAGAGATTAGTAATGTTTCAACTACCTTTAGTAGTGGATCTTTCCCAGCTGTTCCAGATACCATTAAGAAACAAAATCAACCTACACCCTCAGACTCAACTTCTGATTCTCCACACGATGTTTCCAATGAAAATCAAACAAGTGAACAACATGCAACTAATGGTGCTTCTAGAGAGACATGGAAGTGTATGATTATTTTTGTTGTTGTGATGGCCATTGTTATCATAACTCTTTTATATATTTGGAGAAAACGAGCTGTAAAAGTAATAGGCCCCTGGAAGACAGGAATAAGTGGACAATTGCAAAAGGCATTTATAACAGGGGTCCCCAAGTTGAATCGAGATGAATTAGAGACAGCTTGTGAGCATTTCAGCAATATTGTTATTCATTGTTATGAAGGGTGCACCATCTACAAAGGAACGTTATCTAGTGGAGTTGAGATTGCTGTAGTTTCTACTTTGGTTACTTCTTCCCAAGATTGGTCAAAGGACATGGAGTTGAAATATCGCAAAAAGATTGATAATTTGTCTCGGGTAAACCATAAGAACTTTATTAATCTTATTGGGTATTGTGAGGAAGAAGAACCATTCACAAGGATGTTGGTGTTTGAGTATGCTCCAAATGGAAGTGTATTTGAGCATCTGCATGTTTCAGTTGAGGAAATTGAATGTCTTGATTGGACTGAAAGGGTAAGGATTATCATGGGAATTGCTTACTGTCTTCAATACATGCACCATGATTTGAATCCACCAGTGGTTCATAGCAACCTTGTTTCAAATATGATATTTTTAACAGATGATTTTGCTGCTAAGACCGCAGAGGTTACTTTTAGAAATATTGTATCACCAACTGAGACAGCAACTGATTCAAAGAAACCTCAGGCGTCATACCATAACGATCTTGAAAGTAATGTCTTTGACTTTGGAAAGTTATTATTTGAAATCATCTCAGGGAAATTGCCTTACTTTGAAGAACAAGGCAACCTTGTGAACTTGGTTGCAAAGTACATTAATGACAAGAGCAACACCAACTGCTTGATCGATCCCACCCTAAAGTCTTACAAGGAGAATGAATTTAGTGTCATTTGTGACGTGATCCAAGAATGTATCCAACCTGATCCAAAGTTAAGACCAACAATGAGGGACGTGACTTCCAAATTAAGGGAAGAGCTTGGTGTGTCACCCGAGCAAGCGGTGCCAAGACTTTCTCCACTCTGGTGGGCTGAATTAGAGATCTTATCGGTGGAGGCGACTTAA 1989 0.3856 MEMRWNTFGFCLRIYICLIFVWGIRDCWSLNDEGMALLAFRARITSDPLNALVNWNPNDCDPCKWLGVHCVDGKVQMMELKGLSLEGTLAPELGKLSHLNSLVLCKNNFFGAIPKELGDLPKLELLDLRENNLSGRIPTEIGKMSLLKHFVWKSNFKQWNKSYSLVILTKATLLKCLNAFALPLFKLGKSTFHGHEKDYCDLLLSSNVPEIAQNVPELVNSARRKLLQSNGNNLAAAPFSGEPTIEISNVSTTFSSGSFPAVPDTIKKQNQPTPSDSTSDSPHDVSNENQTSEQHATNGASRETWKCMIIFVVVMAIVIITLLYIWRKRAVKVIGPWKTGISGQLQKAFITGVPKLNRDELETACEHFSNIVIHCYEGCTIYKGTLSSGVEIAVVSTLVTSSQDWSKDMELKYRKKIDNLSRVNHKNFINLIGYCEEEEPFTRMLVFEYAPNGSVFEHLHVSVEEIECLDWTERVRIIMGIAYCLQYMHHDLNPPVVHSNLVSNMIFLTDDFAAKTAEVTFRNIVSPTETATDSKKPQASYHNDLESNVFDFGKLLFEIISGKLPYFEEQGNLVNLVAKYINDKSNTNCLIDPTLKSYKENEFSVICDVIQECIQPDPKLRPTMRDVTSKLREELGVSPEQAVPRLSPLWWAELEILSVEAT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0467 662 MobiDBLite consensus disorder prediction 262 298 - -
Aed9g0467 662 SUPERFAMILY L domain-like 29 207 - -
Aed9g0467 662 Gene3D Phosphorylase Kinase; domain 1 343 449 - -
Aed9g0467 662 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Aed9g0467 662 PANTHER PROTEIN MALE DISCOVERER 2 1 662 - -
Aed9g0467 662 Pfam Protein tyrosine and serine/threonine kinase 381 631 IPR001245 GO:0004672|GO:0006468
Aed9g0467 662 Gene3D Transferase(Phosphotransferase) domain 1 450 641 - -
Aed9g0467 662 ProSiteProfiles Protein kinase domain profile. 328 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0467 662 SUPERFAMILY Protein kinase-like (PK-like) 380 630 IPR011009 -
Aed9g0467 662 PANTHER LRR RECEPTOR-LIKE KINASE 1 662 - -
Aed9g0467 662 Gene3D Ribonuclease Inhibitor 33 151 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0467 Aed-Chr9 3249772 3257452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0467 14 631 Receptor kinase-like Gene Family AT2G42290 26.009 1.30e-49 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed9g0467 PK_Tyr_Ser-Thr 7.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0467 - - gmx:100788002 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0467 9 3249772 3257452 Aed9g0467 9 3249772 3257452 ECH
Aed9g0467 9 3249772 3257452 Aed5g1776 5 21386055 21392030 ECH