Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0465 ATGGCCGACGTCGTTTCGAAGAGCCCAACAACCGGGAGCCACATCAGCACTCACAGCAAGAAGGAAACATCGAACCTTTTACTGGGTCGTTTCGAGATTGGGAAGCTTCTGGGGCATGGAACCTTCGCGAAGGTGTACTACGCGCGGAACATCAAAACCAGCCAAGGCGTGGCCATCAAGGTAATCGACAAGGAGAAAATCCTCAAAGGTGGTTTGGTAGCGCACATCAAACGCGAGATCTCCATTCTCCGCCGCGTGCGCCACCCCAACATCGTTCAGCTCTTCGAAGTCATGGCCACCAAGAGCAAGATCTATTTCGTTATGGAGTACGTTCGCGGTGGCGAGCTTTTCAACAAGGTCGCCAAGGGAAGGCTCAAAGAAGAGGTTGCGAGAAAGTACTTTCAGCAATTAATCTCCGCGGTGGGATTCTGCCACGCCCGCGGTGTGTTCCACAGAGATCTCAAGCCTGAAAATTTGTTGCTTGATGAGAATGGCAATCTCAAAGTCTCCGATTTTGGGTTGAGTGCCGTCTCTGATCAAATTAGACAGGACGGTTTGTTCCACACTTTTTGTGGGACTCCTGCGTATGTTGCTCCTGAGGTTTTGGCCAGGAAAGGCTACGATGGTGCTAAGGTGGATCTCTGGTCTTGTGGGGTGGTCTTGTTTGTGTTGATGGCGGGTTATTTGCCTTTTCACGACCAGAATGTGATGGCAATGTATAAGAAGATTTACAGAGGGGAGTTTCGGTGTCCAAGGTGGTTTTCTCCTGATTTGTCCAGGCTTCTCACCAGGCTTCTTGATATCAAGCCCGAAACTCGGATTGCCATTCCTGAGATTATGGAGAACAAGTGGTTCAAAAAAGGGTTCAAGCAGATCAAGTTTTATGTGGAGGATGATAGGCTTTGTAATGTGGTGGATGATGATGCCCTTATGGATAATGATGATGACACTGCTTCGATTGCTTCTTTTTCGGATTACTCAATTTCGGAGTCTGATTCTGAGGTTGAGACCAGGAGGAGGAATGCTCCATTGCCTAGGCCTCCTAGTTTGAATGCCTTTGACATTATATCGTTCTCTTCAGGCTTTAATCTTTCGGGGTTGTTTGAGGAGAAAGATGATGAGACAAGGTTTGTGACTGCTGCACCGGTTAACAGGATCATTTCCAAGTTGGAGGAGATTGCTCAGTTGGTTAGGTTTTCCGTGAGGAAGAAGGATTGCAGGGTGAGTTTGGAGGGTACCAGAGAGGGGGTTAGGGGGCCTTTGACTATTGCTGCTGAGATTTTTGAGTTGACACCTTCTTTGGTTGTGGTGGAGGTGAAGAAAAAGGGAGGGGACAGAGCTGAGTATGAGAGGTTTTGTAACAATGAATTGAAGCCTGGACTGCAGAATTTGATGGCAGAGGAATCTTCATCTTCTTCAGAGTTGTCTACACCTACTCAACCTTCCCTACTACGTGGCCTTTCTGAACCTGTGTCGGGTATTTCTTCTGATACTGAAAGCCCTCGCTATATACCTTCTGATGATTGA 1527 0.4774 MADVVSKSPTTGSHISTHSKKETSNLLLGRFEIGKLLGHGTFAKVYYARNIKTSQGVAIKVIDKEKILKGGLVAHIKREISILRRVRHPNIVQLFEVMATKSKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNVMAMYKKIYRGEFRCPRWFSPDLSRLLTRLLDIKPETRIAIPEIMENKWFKKGFKQIKFYVEDDRLCNVVDDDALMDNDDDTASIASFSDYSISESDSEVETRRRNAPLPRPPSLNAFDIISFSSGFNLSGLFEEKDDETRFVTAAPVNRIISKLEEIAQLVRFSVRKKDCRVSLEGTREGVRGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYERFCNNELKPGLQNLMAEESSSSSELSTPTQPSLLRGLSEPVSGISSDTESPRYIPSDD 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0465 508 SMART serkin_6 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0465 508 MobiDBLite consensus disorder prediction 465 501 - -
Aed9g0465 508 ProSiteProfiles Protein kinase domain profile. 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0465 508 Gene3D Kinase associated domain 1, KA1 345 466 - -
Aed9g0465 508 SUPERFAMILY Protein kinase-like (PK-like) 27 286 IPR011009 -
Aed9g0465 508 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Aed9g0465 508 Pfam NAF domain 347 403 IPR004041 GO:0007165
Aed9g0465 508 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 473 - -
Aed9g0465 508 ProSiteProfiles NAF domain profile. 345 369 IPR018451 GO:0007165
Aed9g0465 508 Gene3D Transferase(Phosphotransferase) domain 1 21 340 - -
Aed9g0465 508 CDD CIPK_C 351 462 - -
Aed9g0465 508 MobiDBLite consensus disorder prediction 465 508 - -
Aed9g0465 508 PANTHER - 9 473 - -
Aed9g0465 508 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0465 508 CDD STKc_SnRK3 30 284 - -
Aed9g0465 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0465 Aed-Chr9 3238106 3239632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0465 26 499 CBL-interacting serine-threonine protein kinases AT4G18700 76.556 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed9g0465 Pkinase 7.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0465 - - gmx:100814720 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0465 9 3238106 3239632 Aed9g0465 9 3238106 3239632 ECH