Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0464 ATGAAGCCCCTTTGCACATTCTTCATTCTCCTTTCGCTGCTTGTTATTCTCGCTGAATCTTCATGCAAAAACGAAGACCGGGTGCTGGTGTCAAAGGCGTTCCAATTCGTTTCTGGATTCAACTCTGCCTGGTTCGAAACAGGTTCCAACTGTTCAAATGCCGAGATTAGAGGGATAAATCTTTCGTCAAAAAACCTAAGTGGGAACATCTCGTGGAAGTATCTGAGAAACATGTCCAAGTTGGAGGTTCTAGATCTGTCTGGGAATTTTCTGCAAGGCCAGGTCCCAAACTGGTTTTGGAGAAGCTCAACCTTATTGGTAGTCAACCTTTCCAGCAACAGGTTCGGAGGGAGCATTAACCCCACTTCCCAAAACGGTTCCTTTTCATCACTGCAAAATCTCAATCTTTCACACAACAGGTTCACTAACCAGCTTCACCTCTCTGGTTTCTCAAAGCTTAAAAGCCTCGACCTTTCGCACAACAACCTCGGAACCTTGCCTTCGGGGTTCCAAAACCTCACCAAACTACACCGCCTCGATCTCTCCAACTGCAACATCAAAGGAAACGTAAAACCCATTTCCTCCCTCACTATACTTTCCTTCTTGGACCTATCAAACAACACGTTGAACGGTAGTTTCCCCTCTGATTTCCCTCCCCTGAACAACATAAAATTCTTGAATATCTCCCACAATAACTTCAAAGCCTCGACCACCTTAGACAGGTTCAAAAAGTTCGGGAAATCAGCATTTATCCACGCCGGGAACAACTTCAACTACACCGCATCCAAAACGGCAAAGCTTCGTTCAACTACAACCCCACCACACCACATTCACGCGGAGGAGGAGAAAAAGAAGAAGAGGACAAAACAAAAACAAAAGTCAAAACGCAAAACCAGAGCCATGATTGTGGCCTCGGCACTTGTCGCTGTCGCGCTGTGCATGTGCTTGTTGGTGGGGTGTTGCAGAAGGAAGAAGCAATTGGCGAAAAGGAAGAAATGGGCGATATCGAAGCCGGTCCCACCGAGTATGAAGATGGAGAAATCAGGACCGTTTGCGTTCGAGACCGAGTCAGGGACATCATGGGTCGCTGACCTCAAAGAGCCCTCTTCCGCACCAGTGGTCATGTTCGAGAAGCCACTCATGAACCTCACCTTCCTCGACCTCCTCGCTTCCACGTCACACTTCGGCAAAGACTCTCTTCTAGCTGAGGGCAGGTGTGGCCCCGTCTACCACGCTGTCTTACCTGGAGACATCCACGTGGCAATCAAAGTCCTCGAAAACGCCAGAGACGTCCATCATGATGACGCTGTCGCTCTCTTCGTTGACCTCTCCCTACTCAAACACCCCAATCTCCTACCCCTCTCCGGTTACTGTATTGCAGGTAGGGAGAAGCTGGTGATGTATGAGTTTATGTCGAACGGGGATTTAGGTAGGTGGTTGCAGGAGCTACCAGCGGGGGAGACTAATGTGGAGGATTGGAGTGGTGACACGTGGGACATTGTTCAAAACGGCGCCGTTTCTCGAGCGTCACCCCCCGAAAAGATTAGATGGTTAATACGGCACCGTATTGCGGTGGGTGTGGCGCGTGGATTAGCGTTTCTGCACCACGCGGGGTCAAGGCCCGTCGTGCACGGCCATCTGGTGACTTCGAACGTGCTTCTCGGCGACGACTTCGAGCCGCGAATCTCGGATTTCGGGTTTCGGAGCGCTGCGGCGAATTGTTCAACCGAGACGGACGTTTACTGCTTCGGGGTGGTGCTGATGGAGTTGCTGACGGGGAGAGCCGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGGCGGTGAGGGAGGGTCACGCGGTGAGGGCGTTGGATGAGAGGCTCAAACTCGGTGGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTCGCATATTTGTGTACGGCCGAGTCACCGGGGAAGAGGCCCAGCATGCAACAGGTCTTGGGCCTTCTCAAAGATATTCACCCGACTCATGGACTCGACTGA 2013 0.5176 MKPLCTFFILLSLLVILAESSCKNEDRVLVSKAFQFVSGFNSAWFETGSNCSNAEIRGINLSSKNLSGNISWKYLRNMSKLEVLDLSGNFLQGQVPNWFWRSSTLLVVNLSSNRFGGSINPTSQNGSFSSLQNLNLSHNRFTNQLHLSGFSKLKSLDLSHNNLGTLPSGFQNLTKLHRLDLSNCNIKGNVKPISSLTILSFLDLSNNTLNGSFPSDFPPLNNIKFLNISHNNFKASTTLDRFKKFGKSAFIHAGNNFNYTASKTAKLRSTTTPPHHIHAEEEKKKKRTKQKQKSKRKTRAMIVASALVAVALCMCLLVGCCRRKKQLAKRKKWAISKPVPPSMKMEKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLTFLDLLASTSHFGKDSLLAEGRCGPVYHAVLPGDIHVAIKVLENARDVHHDDAVALFVDLSLLKHPNLLPLSGYCIAGREKLVMYEFMSNGDLGRWLQELPAGETNVEDWSGDTWDIVQNGAVSRASPPEKIRWLIRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRISDFGFRSAAANCSTETDVYCFGVVLMELLTGRAGTAETVVWVRKAVREGHAVRALDERLKLGGGDSESEMVESLRVAYLCTAESPGKRPSMQQVLGLLKDIHPTHGLD 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0464 670 Pfam Leucine rich repeat 130 186 IPR001611 GO:0005515
Aed9g0464 670 PANTHER KINASE, PUTATIVE-RELATED 3 670 - -
Aed9g0464 670 SMART LRR_typ_2 173 203 IPR003591 -
Aed9g0464 670 SMART LRR_typ_2 78 101 IPR003591 -
Aed9g0464 670 SMART LRR_typ_2 150 172 IPR003591 -
Aed9g0464 670 Gene3D Transferase(Phosphotransferase) domain 1 471 571 - -
Aed9g0464 670 Gene3D Ribonuclease Inhibitor 128 309 IPR032675 -
Aed9g0464 670 ProSiteProfiles Protein kinase domain profile. 395 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0464 670 ProSiteProfiles Leucine-rich repeat profile. 152 174 IPR001611 GO:0005515
Aed9g0464 670 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 670 - -
Aed9g0464 670 SUPERFAMILY L domain-like 52 236 - -
Aed9g0464 670 SUPERFAMILY Protein kinase-like (PK-like) 372 660 IPR011009 -
Aed9g0464 670 Gene3D Phosphorylase Kinase; domain 1 355 470 - -
Aed9g0464 670 Pfam Leucine Rich Repeat 80 99 IPR001611 GO:0005515
Aed9g0464 670 Pfam Protein tyrosine and serine/threonine kinase 399 569 IPR001245 GO:0004672|GO:0006468
Aed9g0464 670 MobiDBLite consensus disorder prediction 273 287 - -
Aed9g0464 670 Gene3D Transferase(Phosphotransferase) domain 1 572 668 - -
Aed9g0464 670 MobiDBLite consensus disorder prediction 267 297 - -
Aed9g0464 670 Gene3D Ribonuclease Inhibitor 22 127 IPR032675 -
Aed9g0464 670 PRINTS Leucine-rich repeat signature 153 166 - -
Aed9g0464 670 PRINTS Leucine-rich repeat signature 196 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0464 Aed-Chr9 3229219 3232053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0464 59 663 Receptor kinase-like Gene Family AT5G07280 31.125 2.66e-72 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Aed9g0464 PK_Tyr_Ser-Thr 5.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0464 - - gmx:100778920 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0464 9 3229219 3232053 Aed9g0464 9 3229219 3232053 ECH
Aed5g1781 5 21424705 21428092 Aed9g0464 9 3229219 3232053 PCT