Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0462 ATGGCTGGGGATAAGGAAACGCCTTCCTCTGTTACCAATGGCGATGGTTCTCTCACTGGTCACATCATATCTACAACTATTGGAGGCAAAAATGGGGAGCCCAAACAGACTATTAGTTACATGGCAGAACGGGTTGTAGGAACTGGATCATTTGGAATTGTTTTCCAGGCAAAATGCTTGGAAACTGGGGAAGCAGTGGCCATTAAAAAGGTTTTACAAGACAGAAGATACAAGAATCGTGAACTACAGTTAATGCGTGTTTTGGATCATCCAAATGTGATATCTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAGCTTTTTCTTAATTTGGTGATGGAATATGTTCCAGAGTCCATGTATAGAGTCATAAAGCACTATGCCAGTGCTAATCAAAGAATGCCAATCATCTATGTTAAACTTTACATGTACCAGATTTTCAGGGGGTTGGCTTATATCCACACTGTTCCCAAAGTTTGCCACAGAGACTTGAAACCTCAAAATATACTGGTGGATCCTCTTACACACCAAGTGAAGCTATGTGATTTTGGAAGTGCAAAAGTTCTAGTCATAGGTGAAGCCAATATATCATACATATGTTCACGATTCTATCGTGCTCCAGAGCTTATATTTGGTGCCACAGAGTATACAGCTTCAATTGATATTTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTTTGGGTCAGGTGCTTGGCACCCCCACTCGAGAGGAAGTCCGCTGTATGAATCCCAATTACAATGACTTTAGGTTTCCACAGATAAAAGCACACCCGTGGCACAAGATATTCCACAAAAAAATGCCTCCAGAAGCTATTGATCTTGCATCCCGGCTTTTGCAATACTCCCCAAGTCTCCGATGCACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTTCGAGAACCCAATGCTCGCCTGCCAAATGGTCGTCCATTTCCTCCTCTATTTAACTTCAAACAGGAATTATCTGAAGCATCTCCAGAGCTTGTTAACAAATTGATACCTGACTATGTGAAGCGGCAAATAGGTATGCAATTTGTTCGTCCAGTGGGACCATGA 1092 0.4231 MAGDKETPSSVTNGDGSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRVLDHPNVISLKHCFFSTTSTDELFLNLVMEYVPESMYRVIKHYASANQRMPIIYVKLYMYQIFRGLAYIHTVPKVCHRDLKPQNILVDPLTHQVKLCDFGSAKVLVIGEANISYICSRFYRAPELIFGATEYTASIDIWSAGCVLAELLLGQVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELSEASPELVNKLIPDYVKRQIGMQFVRPVGP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0462 363 ProSiteProfiles Protein kinase domain profile. 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0462 363 SMART serkin_6 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0462 363 Gene3D Transferase(Phosphotransferase) domain 1 120 350 - -
Aed9g0462 363 MobiDBLite consensus disorder prediction 1 30 - -
Aed9g0462 363 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Aed9g0462 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Aed9g0462 363 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Aed9g0462 363 CDD STKc_GSK3 35 310 IPR039192 -
Aed9g0462 363 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Aed9g0462 363 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 357 - -
Aed9g0462 363 Pfam Protein kinase domain 40 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0462 363 PANTHER BNAANNG31110D PROTEIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0462 Aed-Chr9 3216598 3221283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0462 44 345 MAP Kinase Gene Family AT3G59790 33.533 1.51e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Aed9g0462 Pkinase 2.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0462 K14502 - gmx:100810085 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1783 5 21437695 21442223 Aed9g0462 9 3216598 3221283 PCT