Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0451 ATGGGAGCAGTGGGTGATGGTGGAAGCCGCAGCAGCAGAAAGAAGTCATCATCAAGAGGGCACCACAGGTTTGTGGGGGTTCGACAAAGGCCATCAGGGAGATGGGTGGCAGAGATCAAAGACTCTCTACAAAAGGTTAGGCTTTGGCTTGGAACATTTGACACTGCTGAGGATGCTGCTCGTGCTTATGACAATGCTGCTCGAGCCTTGAGAGGTGCTAATGCTAGAACCAACTTTGACTTGCCTGACTCAGCAGCTTCTTCTGCCGGTGCTACAAAGCGTGGTGGTGGTTCCAACTTTGTGCCTGATTGCACTCAACCCTTTTCTTTTGAGGATGCTAATGACCCTGCAGCAGGTTCAGAAGCTGATCAAGGCCTTCTTGGTGCACTCAAGGCCAAGCTTAATGATGGAAAGAAAGGAAAGCTTCAACAATTTCAATTTCAATTTCTTGGTAATTGTGCTGCCCCATCACCTAATAATAATAATACTGTCCTCTCAAACAGCCCTGTGCATGGTGTAATGAGTACTTGTGCTAATAATAGTGTGGTTATCCCAAATCATGGTCATGATCAAGGTGCTGTAGCAAGCAGTAGTATAGTCAACTACTCTCATCATCAACTTTGTCAGACCCCAGTACCTGTGGCAACATCAACATGGCTAAATGAAGAAGTGGCATATGATTTGCCTTGGCCTACACAATATATGACCCAAGTTCCTGATAATAATAATAATAATAGCCTCCTTGCATCATCTTCGAGTGCTGCATGGCCACTACTCTCTGCAGGGACTACTGTTGATATCACGTCATGCATAGATCATCATCAAGGACCATTATCAAACAGAAGTGGCCAAATGGTGAGCATGCAGTTGCCTATAGTTGGTGGTGCAACTGCAACTGAAGCCCTTTGGACATTGGAGCAACAACAATTTGCTGTGCAATGTGATCAGATCAACAACACTTGGTTTAGTACTTTTAATGGCTCTTGGGATCCTCTCCTATATGTGCATCCCTCTGAGCTAGCTTGA 1026 0.4532 MGAVGDGGSRSSRKKSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDNAARALRGANARTNFDLPDSAASSAGATKRGGGSNFVPDCTQPFSFEDANDPAAGSEADQGLLGALKAKLNDGKKGKLQQFQFQFLGNCAAPSPNNNNTVLSNSPVHGVMSTCANNSVVIPNHGHDQGAVASSSIVNYSHHQLCQTPVPVATSTWLNEEVAYDLPWPTQYMTQVPDNNNNNSLLASSSSAAWPLLSAGTTVDITSCIDHHQGPLSNRSGQMVSMQLPIVGGATATEALWTLEQQQFAVQCDQINNTWFSTFNGSWDPLLYVHPSELA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0451 341 MobiDBLite consensus disorder prediction 78 99 - -
Aed9g0451 341 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Aed9g0451 341 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 CDD AP2 23 80 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 8 149 - -
Aed9g0451 341 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 182 335 - -
Aed9g0451 341 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Aed9g0451 341 MobiDBLite consensus disorder prediction 1 28 - -
Aed9g0451 341 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 8 149 - -
Aed9g0451 341 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 182 335 - -
Aed9g0451 341 SUPERFAMILY DNA-binding domain 24 80 IPR016177 GO:0003677
Aed9g0451 341 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0451 Aed-Chr9 3154509 3155534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0451 13 79 AP2-EREBP Transcription Factor Family AT5G19790 69.118 1.08e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed9g0451 AP2 3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0451 - - gmx:102661478 372.089