Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0441 ATGAAGACCACACAACATTCTCTCTTCTCAGCCCCAATTTTACTAGTTCTAGCACTTATTACCTTCTTCCACACCACTTCAGCCCAACTCACACCAATTCAAGCCCCAGTTTCATCACCCCCATCCCCACCACAACCACAGCCACAACCACCAGCATTCACACCACCCTCTCCACAAGCCACTGCTCCAGCCCCAGGATTCAACACGGTGCCCTTAGTCCCCGTGACACCAAGTGGAGCTCCCACTCCCACCACTATCCCAAAAGCACCCTCCATTGACATAGTCCAAATCTTAAGAAAAGCAAAGAGATTCTCTGTCCTCATCAGGCTTCTCAAAACCACCCAACTCATCAACCAACTCAACTCACAGCTTCTTACCTCAGGCTCGGGAGGGTTAACCCTCTTCGCCCCAGAAGACAGTGCCTTCTCAAAACTAAAAGCCGGTTTCCTCAACTCTCTCAGTGACAGACAAAAAGTGGAACTCTTACAATTCCACACACTCTCTTCCTTCATTTCCATCTCAAACTTCGACACACTCACCAACCCCGTTCAGACTCAGGCCGGCGACGATTCCAAGAGGCTGCAGCTCAACGTAACAACATACGGTGGCAGCCAGGTGAGTATGGCCACCGGCGCCGTCAACGCCTCCGTTAGCGGAACCGTTTACACCGACAACAAGCTCGCCATATACCAGGTGGACAAGGTGCTACTCCCCCTTGACCTTGTGCTTCCCAGCGAGGCCCCGGCACCGGCACCAGGCAAGGCTAAAGGGGCTTCGCCGAAGACGGATAAGGCAAAGTCCGATGATGGCGCCAGCGGTGGTGACAGTGATGGTGGTGATAACAAGGACTTGCCTGCTGAAGCTTCTTCTGCTGGTTCTTCCTTGAGTTTCAAGTTTGGTGTGGTTGCGATTGTTCTTGGGGTGGCTTTAATGGGCGAAGCCATGGTGTGA 951 0.5268 MKTTQHSLFSAPILLVLALITFFHTTSAQLTPIQAPVSSPPSPPQPQPQPPAFTPPSPQATAPAPGFNTVPLVPVTPSGAPTPTTIPKAPSIDIVQILRKAKRFSVLIRLLKTTQLINQLNSQLLTSGSGGLTLFAPEDSAFSKLKAGFLNSLSDRQKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDSKRLQLNVTTYGGSQVSMATGAVNASVSGTVYTDNKLAIYQVDKVLLPLDLVLPSEAPAPAPGKAKGASPKTDKAKSDDGASGGDSDGGDNKDLPAEASSAGSSLSFKFGVVAIVLGVALMGEAMV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0441 316 MobiDBLite consensus disorder prediction 36 62 - -
Aed9g0441 316 Gene3D FAS1 domain 91 238 IPR036378 -
Aed9g0441 316 SMART fasc_3 133 239 IPR000782 -
Aed9g0441 316 MobiDBLite consensus disorder prediction 33 72 - -
Aed9g0441 316 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 316 IPR045003 -
Aed9g0441 316 Pfam Fasciclin domain 103 238 IPR000782 -
Aed9g0441 316 PANTHER FASCICLIN DOMAIN PROTEIN 1 316 - -
Aed9g0441 316 ProSiteProfiles FAS1/BIgH3 domain profile. 91 236 IPR000782 -
Aed9g0441 316 MobiDBLite consensus disorder prediction 259 282 - -
Aed9g0441 316 MobiDBLite consensus disorder prediction 248 290 - -
Aed9g0441 316 SUPERFAMILY FAS1 domain 79 239 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0441 Aed-Chr9 3095269 3096219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0441 - - gmx:100794350 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1808 5 21584586 21588470 Aed9g0441 9 3095269 3096219 PCT