Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0439 ATGGAACCATCAGAGGGGATTTTTCTCCCCCAAAACACAATCTATGAAGCAATTCTGGTGGAATACAAAGCTTCTATAACAGTTTGTGGTGCCAAAATGTCCATATTCAGAGTCTTGACTCTTGACTTGAGCATGATCATCCATATTTCTGAACCACCAGGCCAAGCTTTGTTGTTCATGGACCACCTGAACATGAAGGTAACGGAAGAAAATTTCAAAGCAAAGCAGGGCATAACTGTGAGTTATGAGAATAAGAAGAATAAAGATATTGATGATAGTAATGGAAATGGCATTCCCTCCTCAACCACTAGTTGCCTTGGTGTTAGAAGGGATGCTAAGAAACATGGAAAGAGAGAAGGCACACCCAAGTTAAAGGAGAAGGATAATATTGGCCTTGGAGAAGAAAGAAAGTTGCTGAATGATGAGAAGGTTTCAAAGGAGATGGATGAGTACAATAGAGAAAAGGAATATGAAAACTTGAGAAAGAGATTTGAGAGGAAAGCACAAAAGGCTTTTCAGGAGCAACTCTTGACGTTAGGAAGAGAAGTAGAGGAGGAAGTTGAGTTTGGATCCAATAAAGCAGTGGAAAAAGATGTGTTGCAATTGGAATCACCTAGAACAATTTGCACCCCAAGAACACATGCTTTTTCCTCTTCAGCAGTTTCAAAGAATTCTATCCTTGGAAATATTATAGAAGAGATTGAGAAAACTGAGAGGCCATCTCACAAGAAAATGAGTTCTGAGGAGTTGAAGGTGAAGACTAATAACAGGCAGAAGCAACCACATCATCCCAGCAGAGAAGTTCAGAGGAGGAAACAAAAGCCAAGCTCTAGGGTCAAAATACATTCTCCAAGGATGGTTTCAAAGGTTGAAATCTGCAAAATAAAGGCTCTAGAAGACATGAAGAAAGCAAAACTAAAGACGAAGAAAGAAAGGGAAGATATTGTGGAGGAAACAGCCGGATTAGAGAGCTTTGCTGTGATTAAGTCTTCATTAGATCCAAAGCAAGATTTCAGAGATTCAATGATTGAGATGATCACGGAGAATCAGATTAGCAACCCGGAAGAAATGGAAGATCTGTTGGCATGTTATCTGACTTTGAATGCAGTTGAGTATCATGATCTCATCATCAAAGTGTTCCGCCAGTGTGTGCGCGCTCCTCTGGAAGCACTCAGTGTCAGTGTCAGTGCATCAGTGAAGGCTCTGTCTATCAATATGCAAACAGCTTTCTTTTTCAGACACCTTACCAGCTATTATCAAACGCTTAGCTACATATTTGTCCTCCCATCACGTGTCTGCATCCTGGAAGTTCTTACTCAATGGAGTACTCATTAA 1335 0.4045 MEPSEGIFLPQNTIYEAILVEYKASITVCGAKMSIFRVLTLDLSMIIHISEPPGQALLFMDHLNMKVTEENFKAKQGITVSYENKKNKDIDDSNGNGIPSSTTSCLGVRRDAKKHGKREGTPKLKEKDNIGLGEERKLLNDEKVSKEMDEYNREKEYENLRKRFERKAQKAFQEQLLTLGREVEEEVEFGSNKAVEKDVLQLESPRTICTPRTHAFSSSAVSKNSILGNIIEEIEKTERPSHKKMSSEELKVKTNNRQKQPHHPSREVQRRKQKPSSRVKIHSPRMVSKVEICKIKALEDMKKAKLKTKKEREDIVEETAGLESFAVIKSSLDPKQDFRDSMIEMITENQISNPEEMEDLLACYLTLNAVEYHDLIIKVFRQCVRAPLEALSVSVSASVKALSINMQTAFFFRHLTSYYQTLSYIFVLPSRVCILEVLTQWSTH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0439 444 MobiDBLite consensus disorder prediction 233 281 - -
Aed9g0439 444 MobiDBLite consensus disorder prediction 93 107 - -
Aed9g0439 444 Coils Coil 154 174 - -
Aed9g0439 444 Pfam Transcriptional repressor, ovate 331 383 IPR006458 -
Aed9g0439 444 PANTHER TRANSCRIPTION REPRESSOR OFP4 75 382 - -
Aed9g0439 444 MobiDBLite consensus disorder prediction 264 279 - -
Aed9g0439 444 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 75 382 IPR038933 GO:0045892
Aed9g0439 444 Coils Coil 298 318 - -
Aed9g0439 444 MobiDBLite consensus disorder prediction 87 125 - -
Aed9g0439 444 MobiDBLite consensus disorder prediction 233 263 - -
Aed9g0439 444 MobiDBLite consensus disorder prediction 108 125 - -
Aed9g0439 444 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 326 383 IPR006458 -
Aed9g0439 444 ProSiteProfiles OVATE domain profile. 327 386 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0439 Aed-Chr9 3080163 3085178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed9g0439 Ovate 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0439 - - gmx:102670537 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1811 5 21599966 21601162 Aed9g0439 9 3080163 3085178 PCT