Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0418 TTATCCTTCCTATTTGATCCATTGCCAATACACGCCACTAGTGCGGGAAGAGAGATAAGTAAAAAAGAAAAAAAGGACAAAGAAAATGTCAAAGCAACTATCGAGAGGTATAAAAAAGCATGTTCAGATTCGTCTGGTGCTGGATCTGCTTCTGAGGCTAATGCTCAGTTTTACCAGCAAGAAGCAGATAAACTTCGTGCACAAATTAGTAACCTGCAGAATAACAACAGGCAAGTTGAATCGCAAATGATGGGGGAGTCTTTGGGTTCTATGAGTGCCAAGGAACTCAAAAACCTGGAGACTAAATTAGAAAAAGGAATTAGTAGGATTCGTTCAAAAAAGAACGAGCTGCTATTTGCTGAAATTGAGTACATGCAGAAGAGGGAGATAGACTTGCACAACAACAACCAGCTTCTTCGAGCAAAGATAGCTGAAAGTGAGAGGAGCCACCATAACATGGCTGTTTTGCCTGGAAGCTCAAACTATGACTCTATGCAGTCATCTCAACAGCAATTTGACTCTCGTGGCTACTTCCAAGTTACTGGATTACAACCCAATAATCAATATGCACGGCAAGATCAGATGTCCCTTCAATTAGTTATGAAAAAGACACCTAGCTTGGCATATATGTTTCTCTCAACCTTTGTTCCCTTTCTATATCATAGGTTTTCACATCTATTCACGAATTTTATTTCTCAACTAAACAGCAATATGCAAAATTACACCTCTTAA 732 0.3921 LSFLFDPLPIHATSAGREISKKEKKDKENVKATIERYKKACSDSSGAGSASEANAQFYQQEADKLRAQISNLQNNNRQVESQMMGESLGSMSAKELKNLETKLEKGISRIRSKKNELLFAEIEYMQKREIDLHNNNQLLRAKIAESERSHHNMAVLPGSSNYDSMQSSQQQFDSRGYFQVTGLQPNNQYARQDQMSLQLVMKKTPSLAYMFLSTFVPFLYHRFSHLFTNFISQLNSNMQNYTS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0418 243 PANTHER AGAMOUSB 28 194 - -
Aed9g0418 243 Pfam K-box region 53 143 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed9g0418 243 Coils Coil 96 116 - -
Aed9g0418 243 ProSiteProfiles K-box domain profile. 55 149 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed9g0418 243 PANTHER MADS BOX PROTEIN 28 194 - -
Aed9g0418 243 Coils Coil 20 40 - -
Aed9g0418 243 Coils Coil 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0418 Aed-Chr9 2911375 2919680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0418 30 200 MADS-box Gene Family AT3G58780 57.955 3.38e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0418 K09264 - gmx:732595 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0418 9 2911375 2919680 Aed9g0418 9 2911375 2919680 ECH
Aed5g1823 5 21680980 21685973 Aed9g0418 9 2911375 2919680 PCT