Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0393 ATGCCTAAGCAAATCCATGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTGAAGATCAAGAGAAGCAGAGACGTGGTTAAGTTCAAGGTCAGATGCTCCAAGTACCTCTACACACTGTGTGTGTTTGACCCAGAGAAAGCTGATAAATTGAAGCAATCTCTTCCTCCAGTTCACAGTTCCAAATTTCATTTGGTTAATCTCTCCCAAGTGCTACCTATGCTTTCAACAATAAAGTACCCCTTATTTGCTGGCACCATATCAAGGAGGGAAAATAAATAA 297 0.4209 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPVHSSKFHLVNLSQVLPMLSTIKYPLFAGTISRRENK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0393 98 PANTHER 60S RIBOSOMAL PROTEIN L38 1 65 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aed9g0393 98 Gene3D - 1 67 IPR038464 -
Aed9g0393 98 PANTHER 60S RIBOSOMAL PROTEIN L38 1 65 - -
Aed9g0393 98 Pfam Ribosomal L38e protein family 2 63 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0393 Aed-Chr9 2752171 2753686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0393 1 62 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 93.548 2.65e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0393 K02923 - gmx:100305707 127.872