Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0380 ATGGCTTTTGAGCCATTGGATTGGTATTGTCAGCCAGTTGCAAATGGAGTTTGGTCAAAATCAGTGGAGAATGCCTTTGGTGCTTACACTGCTTGTGCGGTTGATTCTCTGGTCATTTCCATTTCTTATTTGGTACTTCTTGGCCTCTGCATTTACCGCATATGGGTGATTAAGAAGGATTTCACAATCAAGAGGTTCCGTTTAAGGTCAAACCTTTACAATTATATTCTGGGATTGCTAGCTTTATATTGTGTGGCAGAGCCATTATACAGATTGATCATGGGAATATCAGTTCTAAATTTAGACGGGCAGACTCAACTTGCTCCATTTGAGATAGTTTCACTGCTCATTGAGGCTCTTGCTTGGTTCTCTATACTAATTATGATTGGGCTTGAAACTAAAGTCTACATCCGAGAATTCCGGTGGTTTGTCAGATTTGGTTTGATTTATTCTATTGTAGGGGATGCTGTAATGTTCAATTTCATCATTTCTTTGAAGGAGTTCTATAGCAGCTCTGTGCTATATTTATACATCAGTGAGGTGATATGCCAGGTTTTGTTTGGAATACTATTGCTTGTGTATGTTCCTACTTTGGATCCTTATCCGGGTTATACCCCCATTGGGACTGAGATGATTACTGATACTGCATATGATGAACTCCCTGGAGAAGATATGATATGTCCTGAGAGGAGTGCCAACTTATTGTCAAAAATAATGTTTTCTTGGATGAATCCCCTTATGAAACTAGGATATGAAAGACCATTGACAGATAATGATATATGGAAATTAGATACATGGGAGCGGACAGAGACACTGATAAATAAGTTCCAGAAATGTTGGGTTGAGGAATCTCGGAAGCCAAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGCAAGATTGGCAATGATATTTCCCAATTTTTGGGCCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAAATGATGATCCATCCTGGACTGGCTATGTATATGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGAGTGTTATGCGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTACCGGTTAAGATCAACTCTGGTGGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCATGAAGCACGAAAGCAATTTGCAACTGGAAAAATAACTAACTTGATGACTACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCTCCATTTCGAATTGTTGTTGCTATGACATTTATCATCAGCAGAATGCAGAAGTTTTCTAAGGAAGGATTACAACGTACGGACAAAAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAAGTATTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGATTGTCCGAAATGATGAATTATCATGGTTTCGAAAAGCATCATTACTAGGAGCGTGTAATGGATTTATACTAAATAGCATTCCAGTTTTTGTAACTGTGATTACATTTGGAGTATTCACCTTGCTTGGAGGGGATCTGACACCTGCAAGAGCTTTTACATCACTTTCTCTATTTTCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATACTATAACTCAGGTGGTTAATGCAAATGTATCGTTGAAGCGACTAGAAGATTTACTCTTAGCAGAAGAGAGAATACTTCTACCAAATCCACCTCTTGAGCCAGGGTTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCGAAGGCAGAGAGGGCCACATTGTCAAACATAAATTTGGATATACCTCTTGGTTGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTTGTATCTGCAATGCTTGGAGAAATTCCTCCAATCGCAGATTCAACTGTTGTTTTGAGAGGAACAGCTGCTTATGTACCCCAAGTTTCATGGATTTTTAATGCAACTGTACGGGATAACGTTTTGTTTGGTTCTGTCTTTGACCCAACAAGATATCAAAGGGCAATAAATGTGACTGAACTGCAGCATGACCTTGAGTTACTGCCTGGTGGTGATCATACTGAAATTGGTGAAAGAGGGGTGAACATCAGCGGTGGCCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGATCCTCTAAGTGCTCTGGATGCACATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGATTTGAGAGGGAAGACCCGTGTTCTTGTCACGAATCAGCTGCATTTTCTTTCACAGGTTGATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCTAACCATGGACCGCTCTTTCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTATGAAGAAGAAAAGGTAGATACTGAAACCACAGATCAGAAGCCCTCTTCAAAACCAGTGGGCAATGGAGAAGTTAATGATCATGCAAAGAGTGGAAGTAAACCAAAAGAAGGAAAATCTGTTCTTATTAAACAAGAAGAACGAGAAACAGGGGTTGTCAGCTTGAAGGTTCTAGTGAGGTACAAGAATGCATTAGGAGGGTTTTGGGTGGTTTCGGTACTCTTTGCTTGCTATGTCTCAACGGAAACGCTACGAATATCAAGTAGCACATGGTTAAGCTATTGGACTGATCAAAGTGCTACTGAGGGTTATAACCCTGCTTTCTACAATATGATATATGCAGCTCTATCATTTGGTCAGGTTTTTGTGACTTTAACAAATTCTTATTGGTTAATCATATCAAGTCTTTATGCTGCCAGAAGGTTGCACGAAGCCATGCTTAACTCCATATTACGAGCTCCCATGGTGTTTTTCCAAACAAATCCACTTGGAAGAGTTATCAACAGGTTTGCGAAGGATCTGGGAGACATTGATCGTAATGTTGCTCCATTTGTGAATATGTTTCTAGGTCAAGTGTCCCAGCTTTTTTCAACCTTCATCCTCATAGGCATTGTCAGCACAATGTCCTTGTGGGCGATACTGCCATTGTTGGTGTTGTTTTACGTAGCATATCTATACTATCAGAGCACCGCTCGCGAAGTAAAGCGCTTAGACTCGATTAGCAGATCTCCCGTTTACGCACAGTTCGGAGAAGCGTTGAATGGCTTATCAACAATTCGTGCTTACAAAGCGTATGATCGAATGGCAGATATAAATGGGAAATCCATGGACAACAACATCCGATTCACTCTGGTGAACATAAGCGGAAACCGATGGCTCGCAATCCGATTGGAAACTTTGGGAGGCCTCATGATATGGTTGACTGCAACCTTTGCCGTAATGCAGAATGGCAGAGCGGAGAACCAGCAAGAATTTGCATCCACCATGGGGTTACTACTTAGCTATGCTCTGAACATTACTAGTTTGCTTACCGGTGTGCTGAGGCTTGCAAGTTTGGCCGAGAATAGTTTAAATGCAGTTGAACGGATTGGCACTTACATAGAATTGCCCTCGGAGGCTGCCTCTATCATTGATGATAATCGCCCTCCTCCTGGCTGGCCTTCTTCAGGCTCAATCAGATTTGAAGATGTTGTTCTTCGCTACAGACCTGAACTTCCTCCTGTGTTGCATGGCTTGTCTTTCACCATTTTCCCAACCGACAAGGTTGGCATTGTTGGAAGGACAGGTGCAGGAAAATCCAGCATGCTTAATGCTTTGTTTCGAATTGTAGAACTGGAACGAGGAAGAATATTAATTGATGATTACGATGTTGCAAAGTTTGGGCTTGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCATTCAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTATCCGAGGCAGGTGAGAACTTCAGTGTTGGACAAAGGCAACTGTTGAGTCTTTCTCGGGCTTTATTGCGTAGATCGAAGATATTAGTACTTGACGAAGCAACCGCAGCAGTAGATGTTAGAACAGATGCACTAATACAAAAAACAATTCGAGAGGAATTCAAAACCTGTACAATGCTCATTATTGCTCACCGCCTAAACACCATTATTGATTGTGATCGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGATAGTTCTTTCTCTAAGATGGTCCAAAGCACAGGAGCTGCAAATGCCCAATATCTACGCAGCTTAGCACTTGGTGGGGATAAGTCAGAAAGAGAAGAGAACAAGCATCTAGATGGCCAGAGAAAATGGCTGGCTTCTTCTCGATGGGCTGCTGCAGCCCAATATGCTCTTGCTGTTAGTCTCACCTCATCCCATAATGACCTACAACGATTGGAAGTGGAAGACGAGGATAGTATTCTGAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAGAGCAGCGCCAAATATCCCCAGAGGGATGGTGGTCATCGCTTTATAAAATGATTGAAGGTCTTGCTATGATGAGCAGATTGGCTAGGAACAGGCTCCATCAATCAGACTTCGGTTTTGATGACAGATCAATTAACTTCGATCAAGTTGATATGTAG 4785 0.4192 MAFEPLDWYCQPVANGVWSKSVENAFGAYTACAVDSLVISISYLVLLGLCIYRIWVIKKDFTIKRFRLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQTQLAPFEIVSLLIEALAWFSILIMIGLETKVYIREFRWFVRFGLIYSIVGDAVMFNFIISLKEFYSSSVLYLYISEVICQVLFGILLLVYVPTLDPYPGYTPIGTEMITDTAYDELPGEDMICPERSANLLSKIMFSWMNPLMKLGYERPLTDNDIWKLDTWERTETLINKFQKCWVEESRKPKPWLLRALNASLGGRFWWGGFCKIGNDISQFLGPLILNQLLQSMQNDDPSWTGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGYRLRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDAEALQQICQSLHTLWSAPFRIVVAMTFIISRMQKFSKEGLQRTDKRIGLMNEILAAMDTVKYYAWESSFQSKVQIVRNDELSWFRKASLLGACNGFILNSIPVFVTVITFGVFTLLGGDLTPARAFTSLSLFSVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERILLPNPPLEPGLPAISIKNGYFSWDAKAERATLSNINLDIPLGCLVAVVGSTGEGKTSLVSAMLGEIPPIADSTVVLRGTAAYVPQVSWIFNATVRDNVLFGSVFDPTRYQRAINVTELQHDLELLPGGDHTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGDLRGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEELSNHGPLFQKLMENAGKMEEYEEEKVDTETTDQKPSSKPVGNGEVNDHAKSGSKPKEGKSVLIKQEERETGVVSLKVLVRYKNALGGFWVVSVLFACYVSTETLRISSSTWLSYWTDQSATEGYNPAFYNMIYAALSFGQVFVTLTNSYWLIISSLYAARRLHEAMLNSILRAPMVFFQTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLFSTFILIGIVSTMSLWAILPLLVLFYVAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNISGNRWLAIRLETLGGLMIWLTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIELPSEAASIIDDNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPTDKVGIVGRTGAGKSSMLNALFRIVELERGRILIDDYDVAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKTCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEDSSFSKMVQSTGAANAQYLRSLALGGDKSEREENKHLDGQRKWLASSRWAAAAQYALAVSLTSSHNDLQRLEVEDEDSILKKTKDALITLQGVLERKHDKEIEESLEQRQISPEGWWSSLYKMIEGLAMMSRLARNRLHQSDFGFDDRSINFDQVDM 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0380 1594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1212 1446 IPR003439 GO:0005524
Aed9g0380 1594 Pfam ABC transporter transmembrane region 893 1135 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed9g0380 1594 Pfam ABC transporter transmembrane region 428 546 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed9g0380 1594 SUPERFAMILY ABC transporter transmembrane region 889 1192 IPR036640 GO:0005524|GO:0016021
Aed9g0380 1594 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 558 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed9g0380 1594 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 433 1489 - -
Aed9g0380 1594 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 33 433 - -
Aed9g0380 1594 SUPERFAMILY ABC transporter transmembrane region 287 570 IPR036640 GO:0005524|GO:0016021
Aed9g0380 1594 SMART AAA_5 617 795 IPR003593 -
Aed9g0380 1594 SMART AAA_5 1238 1431 IPR003593 -
Aed9g0380 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1202 1444 IPR027417 -
Aed9g0380 1594 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524
Aed9g0380 1594 ProSitePatterns ABC transporters family signature. 1349 1363 IPR017871 GO:0005524
Aed9g0380 1594 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 893 1175 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed9g0380 1594 CDD ABC_6TM_ABCC_D2 891 1187 IPR044726 GO:0140359
Aed9g0380 1594 Gene3D ABC transporter type 1, transmembrane domain 433 576 IPR036640 GO:0005524|GO:0016021
Aed9g0380 1594 Gene3D ABC transporter type 1, transmembrane domain 855 1193 IPR036640 GO:0005524|GO:0016021
Aed9g0380 1594 Gene3D ABC transporter type 1, transmembrane domain 278 432 IPR036640 GO:0005524|GO:0016021
Aed9g0380 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 587 813 IPR027417 -
Aed9g0380 1594 CDD ABCC_MRP_domain1 590 790 - -
Aed9g0380 1594 CDD ABCC_MRP_domain2 1210 1430 - -
Aed9g0380 1594 Pfam ABC transporter 608 743 IPR003439 GO:0005524
Aed9g0380 1594 Gene3D - 585 838 IPR027417 -
Aed9g0380 1594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 590 814 IPR003439 GO:0005524
Aed9g0380 1594 CDD ABC_6TM_ABCC_D1 305 566 IPR044746 GO:0140359
Aed9g0380 1594 MobiDBLite consensus disorder prediction 819 861 - -
Aed9g0380 1594 Pfam ABC transporter 1229 1377 IPR003439 GO:0005524
Aed9g0380 1594 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 433 1489 - -
Aed9g0380 1594 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 33 433 - -
Aed9g0380 1594 Gene3D - 1195 1448 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0380 Aed-Chr9 2626292 2648868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0380 1209 1452 Calmodulin-binding Proteins AT2G36910 31.048 2.43e-29 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0380 - - gmx:100795004 2925.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0380 9 2626292 2648868 Aed9g0380 9 2626292 2648868 ECH