Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0372 ATGAGGAGAAGAAACTGCAACCTCGAACTTGCTCTTTTTCCTCCCTGCGATTCTGGCCCCAGCCACCACCAGCCCACAATGGTTGAAGAAGCTAGCAGTGAGATTAGCCCAATGCAAAATTTCTTCCATCACCACCAGCAGCAGCAACAACCTCTGACAATTTTTTATGATGGCAAGCTTTGTGTTGCTGATGTCACAGAGCTTCAGGCCAGATCGATTTTAATGCTTGCAAATAGAAAATTGGAGGAAAGAGTGAGGACACCAAGTGGGTCAGAGTCAGAGCCATTTTCGTCAACAGCAGCAATGCAATCTAATAATAATCAAATGTATAGCCCTGGCACTGGCCTTTCCATGAGAAAATCGTTGCAAAAGTTCCTTCAGAAGAGAAAGAATCGGGTCCAAGAAGCATCACCTTACCATCACTAA 426 0.4484 MRRRNCNLELALFPPCDSGPSHHQPTMVEEASSEISPMQNFFHHHQQQQQPLTIFYDGKLCVADVTELQARSILMLANRKLEERVRTPSGSESEPFSSTAAMQSNNNQMYSPGTGLSMRKSLQKFLQKRKNRVQEASPYHH 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0372 141 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 3 141 IPR040390 -
Aed9g0372 141 MobiDBLite consensus disorder prediction 90 121 - -
Aed9g0372 141 ProSiteProfiles Tify domain profile. 45 79 IPR010399 -
Aed9g0372 141 PANTHER - 3 141 - -
Aed9g0372 141 SMART tify_2 45 79 IPR010399 -
Aed9g0372 141 MobiDBLite consensus disorder prediction 82 141 - -
Aed9g0372 141 Pfam tify domain 46 78 IPR010399 -
Aed9g0372 141 Pfam Jas motif 119 139 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0372 Aed-Chr9 2557992 2560280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0372 3 140 Tify Gene Family AT1G30135 42.446 4.12e-25 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed9g0372 tify 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0372 - - gmx:100500349 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0372 9 2557992 2560280 Aed9g0372 9 2557992 2560280 ECH