Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0347 ATGTTTGGTCACTGTCGCAGGGCATTGCTCTGCTTCAACCCTAACCCTAACCCCATCACTGCAATCTCAAAACCCTTCTCTCTTCTTCTACCCTTCACCAATTCCTCTTCCGAACAACAACACTCATTCACCTTCAACTACCTAACCAACACCTGCGGCATCACCCCACAAACCGCTTCCAAACTCTCGACCCGAATCCGCTTCGAAACTGCCGACACCCCCGACTCGATCCTCTCCCTCTTCAAAACCCACGGCTTCTCCGACGCCCAAATCCGTCGCATAATCGAATTATACCCAAACTTTCTTCTCTACAACGCCCGCAAAATCATCCTCCCCAAACTCACCTTCCTCCTCTCCAAAGGCGCCTCAACCTCCGACCTCGTCCGCATCGTCGCCAGAAACCCCAGAATCCTCCACTTCGCACTCCACAGCGCCATCACGCCCCGCTATGATTTCATAAAAAAATTCATGCTTTCCGATGACTCCACTCTCCGCTCCATCAAATCGTGCCCCAGCATTGTCTATTCCAAAAACCCATTGCTTAACATTGAGTTCCTCCTCCACAACGGTGTCCCGGAATCCAAGGTTGTCATGTTGCTTCGCTATTGGGCCTCCTCGCTCGTTGCCGATGCCACCACCTTTCAGAATGCGGTTCAGGAGGTTATGGAATTGGGCTTCGGGCCCAACAAAACGTTGTTCTTGATAGCACTTCGTGCTAAGCTCGTGAGGAAATCCTTGTGGGAGAGGAAGATTGAGGTGTATAGGAAATGGGGTTGGTCTGAGGAGATTGTGCTTTCCACGTTTCTGAAGAACCCCTGGTGTATGCTGGTTTCTGAGGAGAAAATTGAGGCCATGATGGGGTTTTGTGTTAATCATTTGGGTTGGGATTCTTTGTTTTTTGCCAAGCATCCGGTGCTTATTTCGTTGAGTTTGGAGAAAAGGGTTGTTCCCAGGGCTTCTGTTTTGTGTTTTCTTTTGTCCAAAGGTTTGGTGAAGGATGTTAATTGGGCCTCCGCGTTTATAGCTCCTGATAAGATTTTCTTGCAGAAATTTGTAGTTTCCTTTGAGAAGGAAGCGGATCAGCTGTTGAAGCTCTATGAAGAGAAGAGAGATCTTCCGAGATAA 1125 0.4871 MFGHCRRALLCFNPNPNPITAISKPFSLLLPFTNSSSEQQHSFTFNYLTNTCGITPQTASKLSTRIRFETADTPDSILSLFKTHGFSDAQIRRIIELYPNFLLYNARKIILPKLTFLLSKGASTSDLVRIVARNPRILHFALHSAITPRYDFIKKFMLSDDSTLRSIKSCPSIVYSKNPLLNIEFLLHNGVPESKVVMLLRYWASSLVADATTFQNAVQEVMELGFGPNKTLFLIALRAKLVRKSLWERKIEVYRKWGWSEEIVLSTFLKNPWCMLVSEEKIEAMMGFCVNHLGWDSLFFAKHPVLISLSLEKRVVPRASVLCFLLSKGLVKDVNWASAFIAPDKIFLQKFVVSFEKEADQLLKLYEEKRDLPR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0347 374 PANTHER CGI-12 PROTEIN-RELATED 26 371 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 Gene3D Transcription termination factor 3, mitochondrial 179 364 IPR038538 -
Aed9g0347 374 Gene3D Transcription termination factor 3, mitochondrial 50 178 IPR038538 -
Aed9g0347 374 Pfam mTERF 78 286 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 Pfam mTERF 183 347 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 26 371 - -
Aed9g0347 374 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 SMART mt_12 197 227 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 SMART mt_12 164 192 IPR003690 GO:0003690|GO:0006355
Aed9g0347 374 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0347 Aed-Chr9 2391480 2392604 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed9g0347 mTERF 5.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0347 K15032 - gmx:102663105 615.15