Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0342 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGACAGTGGTGGGGTGGGGGTCAAGGAGGTGCCCAACAAGGATTCTTCTTTTAAGGAAACTGCTTCTGTTGTTCCTCAGTCTCACCACCCCAGCAGGGTTAACTCAGATAAATCAAAATCATCACGAAGTGGCACAGATCCTAAGAAGGAAATACCGGTTCCAAAGGATGGCCCAACGGCCCATATTGCTGCACAAACATTTACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGACTGTTTATTAGGTGAAGGAGGTTTCGGGCGTGTTTACAAAGGTCGCCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGACCGAAATGGTCTTCAAGGAAATCGAGAGTTTTTGGTTGAAGTTCTTATGCTCAGTCTCTTGCATCATCCAAATCTTGTGAACTTAATTGGTTATTGCGCTGATGGTGATCAGCGGCTACTTGCACGGCCTCTCTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCTGACCCTCTACTCCAAGGCCATTACCCGATGCGAGGACTGTACCAAGCACTTGCAGTTGCTGCAATGTGTCTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTGGTGACTGCTCTCACATATCTGGCCTCGCAGACATATGATCCAAATGCAGCCAATCAATCCAACAGGGTTGGCTCATCAACCCCTAGGATCAGGGATGACAGAAGGAGCATGGCAGATGGTGTGGACAGCCCCGACCGTGGCCGGCTCGGCTCCCCTTCCACCCACAGAAACTCACCCGACTTCAGGAAGAGAGACAGCAGGGATCCAAGCGGTGCGACCGAGTTAGGCAGGATTGACACCAGTGGGGGGTCAGGGAGGAAATGGGGATTGGATGATTATGAAAGGCAGGAGTCGCAGAGAGACAGCCCTGTAAATACTGCAAGAGCAAGAGAGACTCCGTGGAACCGCGACCTGGACAGAGAGCGTGCGGTTGCAGAAGCGAAAGTGTGGGGCGAGAACTGGAGAGAGAAGAAGAAAGCGAATGCCATGGGTAGCTTCGATGCTACGAACGACTGA 1107 0.5086 MGGCFPCFGSSNKEDSGGVGVKEVPNKDSSFKETASVVPQSHHPSRVNSDKSKSSRSGTDPKKEIPVPKDGPTAHIAAQTFTFRELAAATKNFRPDCLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLARPLFKDRRKFPKMADPLLQGHYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAANQSNRVGSSTPRIRDDRRSMADGVDSPDRGRLGSPSTHRNSPDFRKRDSRDPSGATELGRIDTSGGSGRKWGLDDYERQESQRDSPVNTARARETPWNRDLDRERAVAEAKVWGENWREKKKANAMGSFDATND 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0342 368 ProSiteProfiles Protein kinase domain profile. 93 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0342 368 MobiDBLite consensus disorder prediction 244 259 - -
Aed9g0342 368 MobiDBLite consensus disorder prediction 46 69 - -
Aed9g0342 368 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Aed9g0342 368 PANTHER OS07G0668900 PROTEIN 1 165 - -
Aed9g0342 368 PANTHER OS07G0668900 PROTEIN 166 362 - -
Aed9g0342 368 MobiDBLite consensus disorder prediction 231 335 - -
Aed9g0342 368 MobiDBLite consensus disorder prediction 274 289 - -
Aed9g0342 368 MobiDBLite consensus disorder prediction 1 71 - -
Aed9g0342 368 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 165 - -
Aed9g0342 368 MobiDBLite consensus disorder prediction 30 45 - -
Aed9g0342 368 SUPERFAMILY Protein kinase-like (PK-like) 75 167 IPR011009 -
Aed9g0342 368 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 166 362 - -
Aed9g0342 368 Gene3D Phosphorylase Kinase; domain 1 65 166 - -
Aed9g0342 368 Pfam Protein kinase domain 98 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0342 Aed-Chr9 2345833 2352204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0342 166 226 Glycoside Hydrolase AT3G07070 57.377 3.90e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed9g0342 Pkinase 2.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0342 - - gmx:100814575 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0342 9 2345833 2352204 Aed9g0342 9 2345833 2352204 ECH