Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0295 ATGGGCTCAAACCAAGGTTGGACTCCGAAGCAGAACAAGAGATTTGAGAATGCCCTTGCGATCTTCGACAAGGACACCCCAGACAGGTGGCACGTGGTGGCCAGGGCCGTAGGTGGAAAAACGGTGGATGAAGTCAAAAGGCATTATGAGAAGCTCGTCGAAGATGTCAAGCAGATTGAGGAAGGTCACGTGCCCCTCCCCAATTACCGAACCGCTGCTTACGCTTACATGGATGAAGAAACCAGGATGAAGGCTCTGAGTCTGCAGTGA 270 0.5222 MGSNQGWTPKQNKRFENALAIFDKDTPDRWHVVARAVGGKTVDEVKRHYEKLVEDVKQIEEGHVPLPNYRTAAYAYMDEETRMKALSLQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0295 89 SMART sant 3 55 IPR001005 -
Aed9g0295 89 CDD SANT 7 53 IPR001005 -
Aed9g0295 89 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 89 - -
Aed9g0295 89 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Aed9g0295 89 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 89 IPR044636 GO:0003700
Aed9g0295 89 Gene3D - 1 66 - -
Aed9g0295 89 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Aed9g0295 89 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0295 Aed-Chr9 2061671 2062031 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g0295 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0295 - - gmx:100794970 170.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0295 9 2061671 2062031 Aed9g0295 9 2061671 2062031 ECH