Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0291 ATGGGTTGGACACGAGAAGAGAATAGACGTTTTGAGGATGCTCTTGCAGTTCATGGCCCTGATGACCCAAATCGATGGCAACACGTAGCCAACGCCGTGGGTGGAAAATCCGTACAAGAGGTGAAAATGCACTATGAGATCCTCAAAGAAGATGTCATTCAAATAGAGCGTGATCAAATCCCACTTCCCAGGTATAGACCAGCACCTGCCATCAACGGAAGACAAATTCATGACAATGACCAAAGGCGAATGAGGAATCTAAGCCTCCGGTGA 273 0.4725 MGWTREENRRFEDALAVHGPDDPNRWQHVANAVGGKSVQEVKMHYEILKEDVIQIERDQIPLPRYRPAPAINGRQIHDNDQRRMRNLSLR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0291 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Aed9g0291 90 SMART sant 3 51 IPR001005 -
Aed9g0291 90 CDD SANT 3 49 IPR001005 -
Aed9g0291 90 MobiDBLite consensus disorder prediction 64 90 - -
Aed9g0291 90 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Aed9g0291 90 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Aed9g0291 90 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Aed9g0291 90 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Aed9g0291 90 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Aed9g0291 90 Gene3D - 2 51 - -
Aed9g0291 90 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Aed9g0291 90 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0291 Aed-Chr9 2049522 2050418 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed9g0291 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0291 - - gmx:100789698 159.844