Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0272 ATGGCGACTCCTGTTGATCCTCCAAATGGGATCAGAACTGAAGGGAAGCATTATTTCTCCATGTGGCAAACCCTGTTTGAGATTGATTCAAAATACGTGCCCATCAAGCCCATTGGTCGCGGTGCATATGGGATTGTGTGTTCTTCTGTCAATAGAGAGACAAATGAGAAGGTTGCCATCAAGAAGATACAGAATGCCTTTGAAAACCGGGTTGATGCGCTGAGGACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTGATTGCTTTGAAGGACATCATGATGCCTGTTCACAGGAACAGCTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCATCAGATTGTTAAGTCTTCTCAAGCTTTGTCTAATGATCACTGCCAGTATTTCCTCTTTCAGTTGCTTCGGGGCTTGAAATATCTTCACTCAGCTAACATCCTTCACCGTGACTTGAAACCTGGGAATCTTCTAATCAATGCAAATTGTGACCTGAAAATATGCGATTTTGGGTTAGCACGTACTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAGCTCCTACTCTGCTGTGACAACTATGGGATATCTATTGATGTTTGGTCAGTTGGATGCATCTTTGCAGAGCTTCTTGGCCGAAAACCGATATTCCCTGGTTCAGAGTGTCTTAACCAGCTGAAGTTGATTATCAACATCCTTGGTAGTCAAAGGGAGGAAGATATTGCATTCATTGATAACCCAAAGGCAAAGAAGTATATCAAATCAATTCCTTATTCTACTGGAACCCCCTTTTCAGGACTTTATCCTAATGCACATCCATTGGCAATTGATCTTCTGGCAAAGATGCTTGTTTTCGATCCGACAAAGAGGATCAGTGTCACTGAAGCACTTCAACACCCTTACATGGCCCCTCTGTATGATCCTAACAGTGACCCTCCAGCCGTCATTCCAATCGATCTTGACATTGATGAGGATCTCGGGGAAGAGATGATAAGGGAGATGATGTGGAAAGAAATGCTTCATTACCATCCTGAATCTGTTATGGAGAGTGCAGGGTTGGGCTAA 1116 0.44 MATPVDPPNGIRTEGKHYFSMWQTLFEIDSKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVHRNSFKDVYLVYELMDTDLHQIVKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGISIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIAFIDNPKAKKYIKSIPYSTGTPFSGLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPYMAPLYDPNSDPPAVIPIDLDIDEDLGEEMIREMMWKEMLHYHPESVMESAGLG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0272 371 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0272 371 CDD STKc_TEY_MAPK 26 361 - -
Aed9g0272 371 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Aed9g0272 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Aed9g0272 371 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Aed9g0272 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 367 - -
Aed9g0272 371 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Aed9g0272 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 367 - -
Aed9g0272 371 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed9g0272 371 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0272 371 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Aed9g0272 371 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0272 Aed-Chr9 1940395 1943061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0272 1 363 MAP Kinase Gene Family AT1G10210 85.399 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed9g0272 Pkinase 1.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0272 K20535 - gmx:100798863 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0272 9 1940395 1943061 Aed9g0272 9 1940395 1943061 ECH