Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0271 ATGGTCACGTCAAGTGGAAACTCCTCTGTTAGCACAAAATCTCAGAGCTCAGGCTCCGAGGGGGATTTGCAGGTTGTGGTGATAGACGAGAGGAAGAACAAGAGAAAGCAATCGAATCGCGAATCGGCAAGAAGATCTCGGATGCGAAAACGTAACCACTTGGACGATCTCACCAAGCAGCTCTCACAGCTCGCGAAGGATAACAGCCAAATCCTGGGCACCATAGACATCACCGCACAGCACTATCTGAACGTGGAGGCAGAGAATTCCATTCTCAGGGCCCAAATCGCCGAGCTTAGCCAACGCCTCCAATCACTAAACGACATCGTCGACGACATCATCAACGCAACCACCACAGCAACCTACGAAAGGGACTGTTTTCTAACAAGCGCACCAAATTTCACCAACACGCTCTGTCTTAACCAGCCCGTTTTTCAGTGGTGA 444 0.5045 MVTSSGNSSVSTKSQSSGSEGDLQVVVIDERKNKRKQSNRESARRSRMRKRNHLDDLTKQLSQLAKDNSQILGTIDITAQHYLNVEAENSILRAQIAELSQRLQSLNDIVDDIINATTTATYERDCFLTSAPNFTNTLCLNQPVFQW 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0271 147 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Aed9g0271 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Aed9g0271 147 MobiDBLite consensus disorder prediction 1 55 - -
Aed9g0271 147 Coils Coil 82 116 - -
Aed9g0271 147 Coils Coil 47 67 - -
Aed9g0271 147 SUPERFAMILY Leucine zipper domain 31 84 IPR046347 GO:0003700|GO:0006355
Aed9g0271 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Aed9g0271 147 Gene3D - 29 76 - -
Aed9g0271 147 Pfam bZIP transcription factor 31 81 IPR004827 GO:0003700|GO:0006355
Aed9g0271 147 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Aed9g0271 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Aed9g0271 147 MobiDBLite consensus disorder prediction 1 22 - -
Aed9g0271 147 PANTHER BZIP TRANSCRIPTION FACTOR 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0271 Aed-Chr9 1933351 1933794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0271 25 111 bZIP Transcription Factor Family AT2G18160 64.368 5.47e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed9g0271 bZIP_1 9.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0271 K25786 - gmx:778188 216.468