Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0267 ATGTCCAACTCCATTACCCACCAAAACCAATTCGAGAACCAAGAGCTTGATGCTTATGGCTCTTCTATGAGGCACAACAATGCATCATTTCCTGAGGCCTTGGGAGCATTTCCAACCTCTGAGATAAGCCACACAAGGCATTTGATGGATCTTCTTGGAGCAGCAGCAAATGAGAGCAATCACCACCAACCTCAAGGCCTTTCCCTCTCTTTAGGCTCTCACATGCTTGTTCCTTCTGATGAATACAGACACCACCAAAGACCCTTAAACCACCCGGCTCTCATCAACCCCAATTACTTCATCCCTGGACAAGAGCCACGTGAGCCTTGTAACCCAACTGTGGACCATATAGCCAGTGACTACTTTTTCAACCCTGCCACTTTTGCTTCTTCTTCTGCCCCATTCAACCACCGTTCTCCTAATTCCACCCCTTATGCTGCTGAGTCTTTTGCTGCTGTTGTTGGGAACTCGAGGTACCTCAAACCGGTTCAGTCCCTTCTTGAAGATCTTGTTGATGTTGGTGGAAATGTGGTTGATAGAATCAATGACAAGTATGCTGAGAAATTGTTTCGTGGGAGTAGAGGTAGTGCTAGGACACTTTCCTCAGAGTTGAAGGCAGAGTTGAGGAATAATGGACACTTATTGGCTGACAAACATGAAAATCAAATCAAAATTGCAAGGTTGATTTCTTTGTTGGACGAGGTTGAGGGAAGGTGTGAGAAATACTACCATCAAATGGAAGAAGTGGTGTCATCTTTTGAAATGATAGCAGGTTTGGGAGCAGCCAAGTGTTACACTGCTTTGGCACTCCAAGCCATGTCAAGGCATTTCTGCAGCTTGAGAGATGCCATATTGTCACAAATAAATGCTGAGAAAAGAAAACTCTTTCAGGATTTACCTAAGATCAGTAGTGGCTTGTCTCAACTAAGCTTGTTTGATAGAGACAGTAGACAGAGTAGAATGTCTTCTCTCCAACAACTTGGGGTGATCCAAAGCCAACGCCAAGTTTGGAGACCCATCAGAGGCTTGCCTGAAACCTCTGTGGCAATTCTTCGTTCTTGGCTCTTTGAGCACTTTCTCCACCCTTATCCTAATGATTCTGAAAAGTTAATGCTGGCATCTCAGACAGGTTTAACGAAAAACCAAGTCTCAAATTGGTTCATAAATGCTCGAGTACGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAGGAGTTTGGAGAGTCTTCTGAAGACTCCAACCCGGCTGGTAACAACTACTCGACGAGGGAAGATACCACAGACTGTGTAGAGGATTGA 1302 0.4455 MSNSITHQNQFENQELDAYGSSMRHNNASFPEALGAFPTSEISHTRHLMDLLGAAANESNHHQPQGLSLSLGSHMLVPSDEYRHHQRPLNHPALINPNYFIPGQEPREPCNPTVDHIASDYFFNPATFASSSAPFNHRSPNSTPYAAESFAAVVGNSRYLKPVQSLLEDLVDVGGNVVDRINDKYAEKLFRGSRGSARTLSSELKAELRNNGHLLADKHENQIKIARLISLLDEVEGRCEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAILSQINAEKRKLFQDLPKISSGLSQLSLFDRDSRQSRMSSLQQLGVIQSQRQVWRPIRGLPETSVAILRSWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGESSEDSNPAGNNYSTREDTTDCVED 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0267 433 Pfam Associated with HOX 153 284 IPR006563 -
Aed9g0267 433 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 7 417 - -
Aed9g0267 433 SUPERFAMILY Homeodomain-like 343 404 IPR009057 -
Aed9g0267 433 SMART prehox3 148 286 IPR006563 -
Aed9g0267 433 MobiDBLite consensus disorder prediction 406 433 - -
Aed9g0267 433 CDD homeodomain 337 398 IPR001356 GO:0003677
Aed9g0267 433 ProSiteProfiles 'Homeobox' domain profile. 356 397 IPR001356 GO:0003677
Aed9g0267 433 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 417 - -
Aed9g0267 433 Gene3D - 332 412 - -
Aed9g0267 433 Pfam Homeobox KN domain 354 393 IPR008422 GO:0003677|GO:0006355
Aed9g0267 433 SMART HOX_1 337 401 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0267 Aed-Chr9 1913606 1916630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0267 138 427 Homeobox Transcription Factor Family AT2G16400 46.689 1.97e-79 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed9g0267 POX 4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0267 - - gmx:100807944 734.561