Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0266 ATGTATCCCAACCAAGCCTTTTCTTCAGGGTCCTATGCGGAGATGATGTCTGGAACTTCTCTGTTACCTCATGACTACAGTGAATCCGGTGGAGGACAAAACGAGGTTAAGTTTATCACAGCAATGGGTGAGGCAGTGACTATGCACTCTCTTAATAGTCATCATTCCAATGCTGCAACAGGTGATCCATCATGCAACTCTTTTGCTGGGGATTCCCATGTTGTTACAAGGACACAAATGGGAATGGTAGAAAGTGAGCAGCAAAACATAAACTGCCAGGGCTTATCTCTCAGTCTCGGGACACTCATGCCTTCTACTGCATCCGTCTCTCCATTTCAATACCAATATCATGACACTGGTCTCTTACCACTGATGAATGATTATCCAAATCTAAAGGGAGGAGGAGCCATGTCTCTCAAAGATGATGAGGCCAATAACCTGCATAGAGAGTTTAGAAGTGCTGAATGCATGGCATCTGTGTCTTCTGGAGGAGGCTTTCATGACATGATAAAAAAGGAGGGTTTTTACAACCCCCACCCCTCAATGTGTCTCAAAGAAGTCCCCTCTCATCTACAAGGTTACTCAAACAGTATGTTGAACTCCCAATACCTTAAGGCGACACAGGAGTTGCTTGATGAAATAGTTAGTGTTCGAAAGGCTTTGAAGCAACATGGAATGGAAAAACAAGAAAATGGCCGTGACATTAGATTAGATGGCTCTAAGGATTCAGATGGAAAATCTACCAGTCAATCTATGCAAATGTCTTCAGGCCCTAATGGTTCCACTGCCAATGCTTCGAATGAACTATCATCTGCAGAAAGGCAGAACTTGTTGGACAAGAAAACAAAGCTTTTGTCCATGTTGGATGAGGTAGATAAAAGATACAGACAGTACTGGCATCAGATGCAGATAGTGGTTTCATCTTTTGACATGGTTGCTGGGTGTGGAGCAGCAGAACCATATACGACACTTGCATTGAGAACAATATCTCGGCACTTTCGGTGTTTGCGTGATGCAATAAGTGGGCAAATTCAAGTGACACAAAGAAGCCTTGGGGAGCAAGAGGGAATACCCCGTCTCCGGAACGTGGATCAGCAACTTAGACAACAAAAGGCTCTTCAGCAACTTGGTGTAATGCGACAAGCTTGGAGGCCTCAGAGGGGTCTTCCTGAAAGCTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAACATTTTCTTCATCCTTACCCCAAGGATTCGGAGAAAATTATGCTGGCTAGGCAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATCAATGCAAGGGTGCGTCTCTGGAAGCCAATGGTTGAGGAAATGTACAAGGAGGAGTTTGGAGATTCCGAGATGAACTGCAACCTTTCATCTGAGAACACGGTCAAAGGTAAAAGAGATGATGTTGTTCAAGAATCTGATAACATTAACAATAACAACAATAATAATAAATGGGAAGAGTCACAGGACAATTTAGTAACTGTTGACAGTGTCCATGTCCAACAACCTCAAGCAGAACTGGATAGAGGGGTGAATGTAGTAGAAAATGTGGCGATAGGTTCTTCTGGAAGTGGGAAATTGCAGGGCATGAACAACAACAATAACAACAGCAGCAGCCTTTATTCCATCTCAACCAACCAAAACGGTGGGGATGGAGGGTTAATGGGTGGTTCTACTCATGCTCATGGTGCCACATATGATTTATCAGAGTTGGGTAACTTTACTGTGGGTAGCCACGTTTCGCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGGATTTGCCATGTCTGATGATGCCATACACAAAAGACGTAATCAAACATTGGCCTCTTCCCCTGAGGCTGATTTGCTAGATTATCATTTCACGGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCCCATTTGCTGCATGAGTTTGTCGTATGA 1950 0.4395 MYPNQAFSSGSYAEMMSGTSLLPHDYSESGGGQNEVKFITAMGEAVTMHSLNSHHSNAATGDPSCNSFAGDSHVVTRTQMGMVESEQQNINCQGLSLSLGTLMPSTASVSPFQYQYHDTGLLPLMNDYPNLKGGGAMSLKDDEANNLHREFRSAECMASVSSGGGFHDMIKKEGFYNPHPSMCLKEVPSHLQGYSNSMLNSQYLKATQELLDEIVSVRKALKQHGMEKQENGRDIRLDGSKDSDGKSTSQSMQMSSGPNGSTANASNELSSAERQNLLDKKTKLLSMLDEVDKRYRQYWHQMQIVVSSFDMVAGCGAAEPYTTLALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRNVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMNCNLSSENTVKGKRDDVVQESDNINNNNNNNKWEESQDNLVTVDSVHVQQPQAELDRGVNVVENVAIGSSGSGKLQGMNNNNNNSSSLYSISTNQNGGDGGLMGGSTHAHGATYDLSELGNFTVGSHVSLALELRNCESDGFAMSDDAIHKRRNQTLASSPEADLLDYHFTDSGKQQHRFGNPHLLHEFVV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0266 649 MobiDBLite consensus disorder prediction 223 270 - -
Aed9g0266 649 SMART HOX_1 383 447 IPR001356 GO:0003677
Aed9g0266 649 ProSiteProfiles 'Homeobox' domain profile. 380 443 IPR001356 GO:0003677
Aed9g0266 649 Gene3D - 380 457 - -
Aed9g0266 649 SUPERFAMILY Homeodomain-like 384 450 IPR009057 -
Aed9g0266 649 Pfam Homeobox KN domain 400 439 IPR008422 GO:0003677|GO:0006355
Aed9g0266 649 CDD homeodomain 383 444 IPR001356 GO:0003677
Aed9g0266 649 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 28 615 - -
Aed9g0266 649 SMART prehox3 192 342 IPR006563 -
Aed9g0266 649 MobiDBLite consensus disorder prediction 244 270 - -
Aed9g0266 649 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 615 - -
Aed9g0266 649 MobiDBLite consensus disorder prediction 223 243 - -
Aed9g0266 649 Pfam Associated with HOX 199 341 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0266 Aed-Chr9 1907598 1913203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0266 191 648 Homeobox Transcription Factor Family AT2G16400 46.269 7.54e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed9g0266 POX 1.7e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0266 - - gmx:100791641 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0266 9 1907598 1913203 Aed9g0266 9 1907598 1913203 ECH