Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0252 ATGGTGAACGCAGGTGGTTTTCTTCCGGCGATGGATCTTCTCCGGTCAGAGCCAATGCAAATGGTTCAATTGATCATTCCAATTGAATCAGCTCACCGATGCATCTCTTACCTTGGCGATGTCGGCCTCTTCCAATTCAAAGATCTAAATGCAGATAAAAGCCCATTCCAGCGGACTTATGCTTCTCAGATTAAAAGATGTGGGGAAATGGCACGTCGGCTACGGTTGTTTAAGGATCAAATGACGAAAGCAGGTGTATCACCCTCAGCGTGGACAAAAACAGACGATCGTGTTGATCTGGATCTTTTGGAGGTTAAACTACAAGAACTTGAAGCTGAGCTCCTCGAGATTAAAGGAAATAATGAGAAGTTGCAGCACACTTACAATGAGCTGTTAGAGTATAAGCTTGTTCTAGAGAAGGTTGGTGAGTTTTTCTCTTCAGCAAAAAATAATGCTGTAGTTCACCAGAAAATGCTTGAAGTTCAGACATCTGCTGAAGGGTCTATTGACAGCCCATTATTATTGGAACAAGAGGAGACGACATCAAAGCAAGTTAAGCTGGGGTTTATTAGTGGACTTGTTCATAGGGAAAAATCAATTCCTTTCGAAAGAATTATATTTCGTGCTACTAGGGGAAATGTGTTTCTCAAACAGGCTGTGGTTCAACATCCTGTTCTTGATCCTTTGTCAGTAGAGAAGGTTCATAAAAATGTATTTGTTATCTTTTATTCTGGAGAAAGAATTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCTAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAATTTCAAACGATAACAGAGGTTTCAGGAAGACTTTCAGAATTCAAGACTACCATTGATGCAGGATTGCTTCACCGGAGCACTCTAATGCAGACAATTGGATATCACTTTGAGCAGTGGAGCCTTCAGTTGAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAGTCAGATTTGCAAAGCATTGCAGCGGGCAACTACGGACTGCAGTTCTCAAGTTGGGGTGATATTTCAGGTTTTAGAGACAAAGGAATCACCACCTACCTATTTTTGCACAAACAAATTCTCTTCTTCTTATCAAGAAATTGTAGATGCCTATGGAATCGCCAAGTACCAGGAAGTAAATCCCGGTGTATACACAATTGTCACGTTTCCATTCCTTTTTGCTGTGATGTTTGGTGACTGGGGGCATGGGATATGCTTATTACTGGCTGCTTTGTATTTCATAATGAGAGAGAAAAAGTTTTCGAGTCAGAAACTTGGAGACATAATGGAAATGGCGTTCGGTGGACGCTATATTATTATGATGATGGCACTCTTCTCGATATATACCGGGTTGATATATAATGAGTTCTTCTCTATTCCATTTGAACTATTTGGACCATCTGCCTATGGGTGTCGTGATCCTTCATGCAGGGATGCTTCTACAACAGGTTTAATAAAAGTGCGTAGCACTTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAACTGCCATTTCTTAATTCTTTGAAGATGAAGATGTCAATTCTGCTGGGGGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTTCAATGCAAAATACTTCGAAAACAAGATAAATATCTGGTACCAGTTCGTTCCCCAGATGATATTCTTAAACAGCTTGTTTGGCTACCTTTCACTCCTCATAATTATAAAATGGAGCACTGGGTCACAGGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGCCCAACTGATGATTTGGGTGAAAACCAGCTTTTTGCTGGTCAAAAGCTCCTTCAACTCGTGTTACTACTGTTGACACTTGTTGCTGTACCATGGATGCTATTACCAAAGCCCTTTCTCCTGAAAAAGCAACACCAAGAAAGGCATCAAGGTCAATCTTACTCTGTGCTCTACAGCGCGGATGACCCAGACCCTCTCGAATCAGAGCCAGTTAGTACTCCCCGTGACCATGAGGAGTTTGATTTCAGCGAGGTTTTCGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTTTCTAACACAGCTTCGTATCTACGTCTATGGGCCCTCAGCCTAGCTCATTCGGAGTTGTCCAGTGTTTTCTATGACAAAGTTCTGCTTCTGGCCTGGGGGTTTAATAACACTATAGTTCTCATTATTGGCATTTTTGTTTTTATCTGTGCAACCGTTGGTGTGTTACTGTTAATGGAATCTCTAAGTGCTTTCTTACATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCTTTCCCTTTTCATTTACATTACTCACGGATGAGGATGAACTGTAA 2460 0.4065 MVNAGGFLPAMDLLRSEPMQMVQLIIPIESAHRCISYLGDVGLFQFKDLNADKSPFQRTYASQIKRCGEMARRLRLFKDQMTKAGVSPSAWTKTDDRVDLDLLEVKLQELEAELLEIKGNNEKLQHTYNELLEYKLVLEKVGEFFSSAKNNAVVHQKMLEVQTSAEGSIDSPLLLEQEETTSKQVKLGFISGLVHREKSIPFERIIFRATRGNVFLKQAVVQHPVLDPLSVEKVHKNVFVIFYSGERIKSKILKICDAFGANRYPFSDDLSKQFQTITEVSGRLSEFKTTIDAGLLHRSTLMQTIGYHFEQWSLQLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQICKALQRATTDCSSQVGVIFQVLETKESPPTYFCTNKFSSSYQEIVDAYGIAKYQEVNPGVYTIVTFPFLFAVMFGDWGHGICLLLAALYFIMREKKFSSQKLGDIMEMAFGGRYIIMMMALFSIYTGLIYNEFFSIPFELFGPSAYGCRDPSCRDASTTGLIKVRSTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYFNAKYFENKINIWYQFVPQMIFLNSLFGYLSLLIIIKWSTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKLLQLVLLLLTLVAVPWMLLPKPFLLKKQHQERHQGQSYSVLYSADDPDPLESEPVSTPRDHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIIGIFVFICATVGVLLLMESLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLTDEDEL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0252 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 819 - -
Aed9g0252 819 PANTHER VACUOLAR PROTON ATPASES 11 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aed9g0252 819 Coils Coil 93 127 - -
Aed9g0252 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220|GO:0046961
Aed9g0252 819 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0252 Aed-Chr9 1811146 1819457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0252 11 818 Primary Pumps ATPases(2) AT4G39080 73.671 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0252 K02154 - gmx:100805813 1471.45