Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0251 ATGGCTGGGTTCTTCTCTCTAGGTGGAACACAAAACAAGGAAGAAGAGGAAGTAGAAAAAGGAGAAAAGAATAACCTATTGTTGTTCAGGAACGAGGAGATCTACAACAAGGGGCAGCAGAGCCAGGGGTTCGAGATATGGCCAGCACAGTCATCGTATCATCAGCATCAACAGTTGAGCAACAACTACTTTGCGTTTGGAGTGGGTCCTAGTCGCAGGAACAACAACAGCTCGGAGGACGTTTCATTCTGCGTGTCTGATGAATCAACGAGATTTGGATTAACCGTGATGAGGTCTGCAGGAGGAGGAGGAGGAGGAAGCAGCAGCGGTGGTGGCATGAACTGTCAGGACTGTGGGAACCAAGCCAAGAAAGACTGTTCGCATCTCAGATGCAGGACTTGCTGTAAGAGCCGAGGCTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTTCCCGCTGCCAAGCGCCGTGAACGACACCAACAACTCGCTGCGTTGCAAACGCACCACCACCAACAATTGCGCGGACACGGAGGTGGAGACAACATTAATATTACTAATATTCCTAAACGACATCACAGAGACCCTATTTCTACTCAACCCATCACAGGGTTAGAGTTGGGACAATTCCCAGCTGAAGTGAGCACTTCGGCGGTGTTTCGGTGTGTGAGAGTGAGCGCAGTGGACGCTTCGGAAGAACAGTGTGCGTATCAAACCTCTGTCAACATCGGAGGACATGTTTTCAAGGGATTTCTCTACGATGAAGGTCCTGAAAGTTCTTACACTGGTGCAGCAGCTGCAGCAGCTGAGGGTTCCTCCGGTACTGGTGAACCTCAACAACTTGGTTTATTAACTGCCGCAACAACCAGTGTGAACAACCCATTTGAACCTTCACTTTACCCACCTCCGCTGAATGCTTTCATGGCTGGTACGCAATTCTTCCAACCCCCAAGGTCCTAA 960 0.5 MAGFFSLGGTQNKEEEEVEKGEKNNLLLFRNEEIYNKGQQSQGFEIWPAQSSYHQHQQLSNNYFAFGVGPSRRNNNSSEDVSFCVSDESTRFGLTVMRSAGGGGGGSSSGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERHQQLAALQTHHHQQLRGHGGGDNINITNIPKRHHRDPISTQPITGLELGQFPAEVSTSAVFRCVRVSAVDASEEQCAYQTSVNIGGHVFKGFLYDEGPESSYTGAAAAAAEGSSGTGEPQQLGLLTAATTSVNNPFEPSLYPPPLNAFMAGTQFFQPPRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0251 319 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 114 156 IPR006510 -
Aed9g0251 319 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 317 - -
Aed9g0251 319 MobiDBLite consensus disorder prediction 1 20 - -
Aed9g0251 319 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 209 257 IPR006511 -
Aed9g0251 319 Pfam Domain of unknown function (DUF702) 112 258 - -
Aed9g0251 319 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 317 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0251 Aed-Chr9 1802273 1803694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0251 1 319 C2H2 Transcription Factor Family AT1G75520 43.869 6.42e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aed9g0251 DUF702 3e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0251 - - gmx:100818588 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0073 11 586680 588310 Aed9g0251 9 1802273 1803694 PCT