Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0244 ATGGCAACAACGGTTATATTCTTCACCCTCTTCGCCACCCTCACCATAACCTACGCCCAGAACAACACAGCATTAGAGATTGAAGCATTAACCTCATTCAAGCTCAGCCTCCACGACCCTCTCGGCTCCTTAGACGGTTGGGATCCTTCCACGCCGTCAGCACCCTGCGACTGGCGCGGCATTGTCTGCCACAACAACCGTGTTCACCACCTCCGCTTACCGCGTCTCCAACTCTCCGGTCAACTCGCTCCTTCTCTTTCCAACCTCCTTCAACTCCGCAAACTCAGTCTCCACTCCAACAACCTCAACTCCTCCATTCCCCCCTCTCTCACGCGCTGCGTCTTCCTACGCGCCGTTTATCTCCACAACAACAAACTCTCCGGCCGCCTCCCTCCACCGCTCCTCAACCTCACCAACCTCCAAATCCTCAATCTCGCCCGCAACCTCCTCACCGGAAAAGTCCCCGGCCACCTCTCCGCCTCCCTCCGCTTCCTCGACCTCTCCAACAACGCCTTCTCCGGCGATATTCCGGTGAACTTCTCCTCCAAATCTCAGCTCCAGCTCATCAACCTCTCCTACAACGGCTTCACCGGAGGAATACCTTTCTCCGTCGGAACGCTGCAAAATCTGCAGTTCCTATGGTTAGACTCAAACCACATTGAGGGAACCCTACCTTCGGCGCTGGCGAACTGTTCCTCTCTGGTGCACCTCACCGCAGAGGATAACGCTCTCACTGGACTTCTTCCTCCCACGCTGTCGAAGCTTCAAGTGCTTTCGCTTTCGCGGAACCAACTTTCCGGTTCGGTCCCCGCGTCTCTCTTCTGCAACTCGCACCTGCGAAGCGTCAACCTCGCCTTTAATTCCTTCACGGGTCTCTCCACGCCGCAAAATGGGGAATGCAACAGCGTTTTAGAGGTTCTAAATATTAAACAGAATCGCATTGTACACGCGCCGTTTCCCTCGTGGTTGACCCACGCCACCACGACGTCGTCATTGAAGGCACTTGATCTTTCTGGAAACTTCTTCACCGGTTCTCTGCCGGTGGACATTGGAAACCTTTCCGCGTTGGAAGAGTTGAGAGTCGCGAATAATTTGTTATCCGGTGGAGTTCCGCTTAGCATTGTGAGTTGTAGGTTGTTAACGGTTCTTGATCTTGAGGGTAACCGGTTCTCCGGGTTAGTTCCTGAGTTTCTTGGGGAACTGAGGAACCTGAAGGAGTTGTCTCTAGCCGGTAACCTTTTTACCGGTTCGGTGCCTTCTAGTTATGGAACGCTCTCTGCGCTTGAGACGCTGAATTTAAGTGATAATAAGTTAACCGGTGTGATGCCTGATGAGATCATGCAGTTGGGGAACGTGAGCGCTTTGAATCTCAGCAATAACAAATTTTCGGGTCAAGTTTGGTCTAATATCGGGGACTTGACGGGTTTGCAGGTTCTTAACTTGAGTCAGTGTGGGTTTTATGGAAGGGTTCCTAGTTCGCTGGGGAGTTTGATGAGACTAACGGTGTTGGATTTGAGCAAGCAAAACCTCTCGGGTGAGTTGCCCCTTGAGGTTTTTGGGTTACCGAGTTTGCAAGTTGTGGCGCTTCAAGAGAACCGTTTGAGTGGTCATGTTCCTGAGGGCTTCAGCAGCATAGTTAGTTTGCAGTATCTTAACCTCACCTCAAATGAATTTGTCGGTAACATTCCAATAACTTATGGATTCCTTGGTTCTTTAAGGGTCCTCTCTTTGTCTCGCAACGGTGTTTCTGGTGAAATACCTCCCGAGATTGGTGGTTGTTCGCAACTCCAAGTTTTGCAGCTGCGGTCGAATTTTCTAGAGGGTAACATTCCGGGTGATATCTCTCGACTCTCTCGTTTAAAGGAGCTTAATTTGGGACACAATAGATTGAAAGGTGATATCCCAGATGAAATATCAGAGTGTTCTGCTTTGAGCTCACTCTTGTTGGATGGTAATCACTTAACGGGTGATATACCAGGTTCCTTGTCAAAACTGTCAAATTTGACAGTGTTGAATCTTTCTTCAAATCAATTGACAGGGGGAATTCCGGTTGAACTATCGAGCATTTATGGTTTGGAGCATTTAAATGTGTCTAGCAATAACCTGGAGGGTGAGATTCCATACATGCTTGGTAACAGATTCAACGACTCTTCCGTGTTTGCAATGAACCAAGGGTTATGCGGGAAGCCCTTGCGCAGAGTGTGCGCGAGTGAAAAAAGGAGGAAGAGGAGAAGGCTAATAATCTTCATAGGCGTGGCCGTGGCTGGTTTGTGCCTTCTGGCGCTGTGTTGTTGTGGGTATGTTTACAGCCTCTTGAGGTGGCGCAAGAAGCTTCGAGAAGGGGTAACGGGTGAGAAGAAACGGAGCCCCACAACAAGCAGTGTTAGCAGAGGAAGTGGAGAAAACGGTGGACCAAAGCTAGTGATGTTCAACAACAAGATCACGTTGGCGGAGACACTGGAAGCAACGAGAAACTTCGATGAAGAGAACGTGTTGAGCAGGGGAAGATACGGCCTCGTCTTCAAAGCCTCTTACCAAGACGGAATGGTTCTCTCGATTCGTCGATTTCTCGATGGCTTCATAGACGAAGCCACGTTCCGCAAAGAAGCAGAGTCACTGGGAAAAGTGAAGCATCGGAACTTAACAGTTCTGCGTGGCTACTATGCAGGACCACCCGATATGAGACTTCTTGTGTACGACTACATGCCCAATGGGAACTTAGGAACGCTTCTTCAAGAGGCATCTCAGCAAGATGGCCATGTGCTGAATTGGCCAATGCGTCATCTCATTGCACTGGGCATTGCTCGCGGCCTAGCTTTCTTGCACTCGGTGCCAATAGTCCATGGTGACGTGAAGCCTCAAAATGTTCTCTTTGATGCAGATTTTGAAGCCCATTTGTCTGAATTTGGGTTGGAGCGGTTGACAATGGCAGCAGCAGCAGCAGAAGCGTCGTCGTCGTCGACCCCAGTTGGGTCCATAGGGTATGTTTCGGCGGAAGTAGCGTCGAGTGGGGTGGCGACAAAGGAGGGTGACGTATATAGCTTTGGGATAGTGTTGTTGGAGACACTGACGGGGAAGAAACCGGTGATGTTCACGGAGGAGGAAGATGAGGACATAGTGAAGTGGGTGAAGAAGCAGTTACAAAGGGGACAAGTGTCGGAGTTGTTAGAGCCAGGGTTGCTTGAGCTTGACCCGGAGTCTTCGGAATGGGAAGAGTTTTTGTTGGGTGTGAAAGTTGGTCTACTATGCACAGCGACGGATCCTCTTGATCGACCATCCATGTCTGACGTTGCTTTCATGCTCCAAGGTTGCCGGGTTGGACCAGAAATTCCATCGTCTGCTGATCCCACAACACTACCTTCCCCTGCTTGA 3372 0.503 MATTVIFFTLFATLTITYAQNNTALEIEALTSFKLSLHDPLGSLDGWDPSTPSAPCDWRGIVCHNNRVHHLRLPRLQLSGQLAPSLSNLLQLRKLSLHSNNLNSSIPPSLTRCVFLRAVYLHNNKLSGRLPPPLLNLTNLQILNLARNLLTGKVPGHLSASLRFLDLSNNAFSGDIPVNFSSKSQLQLINLSYNGFTGGIPFSVGTLQNLQFLWLDSNHIEGTLPSALANCSSLVHLTAEDNALTGLLPPTLSKLQVLSLSRNQLSGSVPASLFCNSHLRSVNLAFNSFTGLSTPQNGECNSVLEVLNIKQNRIVHAPFPSWLTHATTTSSLKALDLSGNFFTGSLPVDIGNLSALEELRVANNLLSGGVPLSIVSCRLLTVLDLEGNRFSGLVPEFLGELRNLKELSLAGNLFTGSVPSSYGTLSALETLNLSDNKLTGVMPDEIMQLGNVSALNLSNNKFSGQVWSNIGDLTGLQVLNLSQCGFYGRVPSSLGSLMRLTVLDLSKQNLSGELPLEVFGLPSLQVVALQENRLSGHVPEGFSSIVSLQYLNLTSNEFVGNIPITYGFLGSLRVLSLSRNGVSGEIPPEIGGCSQLQVLQLRSNFLEGNIPGDISRLSRLKELNLGHNRLKGDIPDEISECSALSSLLLDGNHLTGDIPGSLSKLSNLTVLNLSSNQLTGGIPVELSSIYGLEHLNVSSNNLEGEIPYMLGNRFNDSSVFAMNQGLCGKPLRRVCASEKRRKRRRLIIFIGVAVAGLCLLALCCCGYVYSLLRWRKKLREGVTGEKKRSPTTSSVSRGSGENGGPKLVMFNNKITLAETLEATRNFDEENVLSRGRYGLVFKASYQDGMVLSIRRFLDGFIDEATFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVPIVHGDVKPQNVLFDADFEAHLSEFGLERLTMAAAAAEASSSSTPVGSIGYVSAEVASSGVATKEGDVYSFGIVLLETLTGKKPVMFTEEEDEDIVKWVKKQLQRGQVSELLEPGLLELDPESSEWEEFLLGVKVGLLCTATDPLDRPSMSDVAFMLQGCRVGPEIPSSADPTTLPSPA 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0244 1123 MobiDBLite consensus disorder prediction 783 806 - -
Aed9g0244 1123 ProSiteProfiles Leucine-rich repeat profile. 619 641 IPR001611 GO:0005515
Aed9g0244 1123 Gene3D Ribonuclease Inhibitor 160 451 IPR032675 -
Aed9g0244 1123 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1119 - -
Aed9g0244 1123 ProSiteProfiles Protein kinase domain profile. 826 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0244 1123 SUPERFAMILY L domain-like 50 320 - -
Aed9g0244 1123 PANTHER LRR RECEPTOR-LIKE KINASE 3 1119 - -
Aed9g0244 1123 SMART LRR_typ_2 569 593 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 207 230 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 665 689 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 252 276 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 378 399 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 473 497 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 353 377 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 425 448 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 617 641 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 401 424 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 521 544 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 89 113 IPR003591 -
Aed9g0244 1123 SMART LRR_typ_2 137 161 IPR003591 -
Aed9g0244 1123 SUPERFAMILY Protein kinase-like (PK-like) 806 1112 IPR011009 -
Aed9g0244 1123 Gene3D Transferase(Phosphotransferase) domain 1 902 1109 - -
Aed9g0244 1123 Pfam Leucine rich repeat 571 630 IPR001611 GO:0005515
Aed9g0244 1123 Pfam Leucine rich repeat 643 702 IPR001611 GO:0005515
Aed9g0244 1123 Pfam Leucine rich repeat 402 462 IPR001611 GO:0005515
Aed9g0244 1123 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Aed9g0244 1123 SUPERFAMILY L domain-like 499 714 - -
Aed9g0244 1123 SMART serkin_6 826 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0244 1123 Gene3D Ribonuclease Inhibitor 452 738 IPR032675 -
Aed9g0244 1123 Pfam Protein tyrosine and serine/threonine kinase 829 1047 IPR001245 GO:0004672|GO:0006468
Aed9g0244 1123 Gene3D Phosphorylase Kinase; domain 1 796 901 - -
Aed9g0244 1123 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Aed9g0244 1123 Gene3D Ribonuclease Inhibitor 24 159 IPR032675 -
Aed9g0244 1123 ProSitePatterns Serine/Threonine protein kinases active-site signature. 946 958 IPR008271 GO:0004672|GO:0006468
Aed9g0244 1123 SUPERFAMILY L domain-like 328 565 - -
Aed9g0244 1123 PRINTS Leucine-rich repeat signature 428 441 - -
Aed9g0244 1123 PRINTS Leucine-rich repeat signature 665 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0244 Aed-Chr9 1751057 1754428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0244 1 1123 Receptor kinase-like Gene Family AT1G75640 62.664 0.0 1310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Aed9g0244 PK_Tyr_Ser-Thr 6.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0244 - - gmx:100801571 1894.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0244 9 1751057 1754428 Aed9g0244 9 1751057 1754428 ECH