Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0243 ATGGCGGAAGACGACGTCGGAGTAACCTCCAAAACCACCACAAACTTCAGATTCTGGCCTCGTTGGATTCCCACTTCCATGGATCACATAATCGCCGCCGAGAAGCGCCTTCTTTCCGTTGTCAAGACTGGTTATGTTCAAGAGCATGTTAACATAGGCTCTGGTCCTCCTGGCTCCAAAGTCAGATGGTTCCGTTCATCCAGCAATGAGCCGCGCTTTATTAACACCGTTACATTTAACAGTAAACCCGATTCTCCAACGCTTGTCATGATTCATGGTTATGCTGCTTCCCAGGGCTTCTTTTTTCGCAATTTTGATGCGCTTGCGTCTCGATTCAGAGTCATTGCTGTTGATCAACTTGGATGGGGTGGATCAAGCAGACCTGATTTCACATGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACTTGAGCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTCAAGCACCCTGAGCATGTACAACACTTGATTCTGGTTGGATCTGCTGGATTTTCATCAGAATCAGATGCAAAGTCTGAGTGGATTACTAGGTTTCGAGCAACGTGGAAGGGAGCAGTTTTGAACCATCTATGGGAATCAAATTTCACACCTCAGAAACTTGTCAGGGGTTTAGGTCCTTGGGGTCCCAACATAGTTCGCAGGTATACAAGTTCTAGGTTTGGTTCACATTCAACTGGGGAAATACTGACTGAAGAGGAATCAACATTGCTGACAGACTATGTTTACCACACATTGGCGGCCAAAGCTAGTGGAGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCTAGGATGCCCCTTCTTTGCAGTGCCTCCGAGTGGAAGGTGCCCACCACTTTCATATATGGTTTCCAAGACTGGATGAATTATCAAGGTGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGCGAAATCATCAGGGTTCCTCAGGCTGGGCACTTTGCGTTCATTGACAGCCCAACTGCCTTCCATTCAGCTGTTTTTTATGCTTGCCGAAGGTTTCTTACAACTCATCCAGACAATGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG 1149 0.4526 MAEDDVGVTSKTTTNFRFWPRWIPTSMDHIIAAEKRLLSVVKTGYVQEHVNIGSGPPGSKVRWFRSSSNEPRFINTVTFNSKPDSPTLVMIHGYAASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDAKSEWITRFRATWKGAVLNHLWESNFTPQKLVRGLGPWGPNIVRRYTSSRFGSHSTGEILTEEESTLLTDYVYHTLAAKASGELCLKYIFSFGAFARMPLLCSASEWKVPTTFIYGFQDWMNYQGAQEARKHMKVPCEIIRVPQAGHFAFIDSPTAFHSAVFYACRRFLTTHPDNESLPEGLTSA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0243 382 PANTHER RE40534P-RELATED 19 369 - -
Aed9g0243 382 PRINTS Epoxide hydrolase signature 174 187 IPR000639 GO:0003824
Aed9g0243 382 PRINTS Epoxide hydrolase signature 339 361 IPR000639 GO:0003824
Aed9g0243 382 PRINTS Epoxide hydrolase signature 111 126 IPR000639 GO:0003824
Aed9g0243 382 PRINTS Epoxide hydrolase signature 306 322 IPR000639 GO:0003824
Aed9g0243 382 PANTHER BNAA01G13630D PROTEIN 19 369 - -
Aed9g0243 382 Gene3D alpha/beta hydrolase 72 366 IPR029058 -
Aed9g0243 382 SUPERFAMILY alpha/beta-Hydrolases 75 358 IPR029058 -
Aed9g0243 382 PRINTS Alpha/beta hydrolase fold signature 111 126 IPR000073 -
Aed9g0243 382 PRINTS Alpha/beta hydrolase fold signature 174 187 IPR000073 -
Aed9g0243 382 PRINTS Alpha/beta hydrolase fold signature 160 173 IPR000073 -
Aed9g0243 382 Pfam alpha/beta hydrolase fold 86 206 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0243 Aed-Chr9 1744840 1749679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0243 66 193 Acyl Lipid Metabolism Gene Families AT1G64670 33.577 2.59e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0243 - - gmx:100791981 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0243 9 1744840 1749679 Aed9g0243 9 1744840 1749679 ECH
Aed11g0069 11 555439 558867 Aed9g0243 9 1744840 1749679 PCT