Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0238 ATGGAAGGTGTTGATCAAAGAAATAGTGCTGCATTTGGTGTTCCAGTTCCAAGACCACCTGCTAACCAGAAACCTGGTATACCACCCTCTCACCCTAATATCAATGTTTCACCTTCAGCAACTCCTTATTCCCAATATTCTCAGCGATTGCGTTCTCCCGGTTCCTCCCATTCGAGGTCTTTGTCTCAACCTCCCATTTTCTCGTTGGATTCATTGCCCCCATTGAGTCCTTCACCTGCTGCTGCTGTTGTTACCTCCATGTTTGATTCAATCTCGACAACTGATATGCCTATGGAGGAAAGTAATGTTTCCTCTCAAGTTCCCCTCAATAGAGGGCATGCCCTTCTTCCTCCTAGGAAAGGACACAGGCGCTCTAGTAGTGATTCCCCTTTGGGAATCTCTGGTTTCACACAGTCTTCTCCGGTTCCCTCGGGAGGAGAGAGCTCGGGGGGATTTGAGAAGCCGATTCAGTTGGTCTTGAAGGCATCGTTTAGGGACTGCCTGGACGGGGACCGTGCTAATGAGCCTGTGAATGAGAGGAAGGAGGAGACTATGGATGATTTGTTCAGGGAATACATGAATTTGGACAACTTTGATAATCTGAACTTTCCTGGCATGGAAGATAAGGATTTGGATAGCAGGACCAGTGGTTCCAAGACAGTTGAGAGCAGCGATAATGAAGTTGAGAGTCATGTGAATGGGAAGGTGAGTGGGTCTCACGGGGCGAGTTCGAGCTGCTCGGAGGAAAGAAGGGAAGGAGTCAAGAGGAGTTCAAATGGGGATGTTGCACCGAGTTCCCGGCACCGGAGGAGTTTCTCGCTGGATAGTTCCATAGGGAACTTTAACATTGAGGATGGATTGCCAAAGCTTCCTCGTTCAAAAAATAAAAATTGTCAGCACTCACCTAGCAATTCAATGGATGGAAAAGTGTCAGAAACCTCCACAGAGTTTGGAAATGGTGAATTCAGTGCAGAGGAGGTAAAGAAAATAATGGAAAGTGATAAACTAGCAGAAATTGCTTCGACTGATCCCAAACGTGCAAAAAGGATTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGAGGAAGACCCGATACATTGCTGAATTGGAACACAAAGTGCAAACTCTTCAGACAGAAACAACCACATTGTCTACTCAGTTTACCAAATCACAGAGGGATAACTCCGAGCTTAAAAGTGAGAACAATGAGTACAAATTAAGGCTTCAAGCGATGGAACAGCAATCTCAATTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGGCGTTTGAGGCGTGCTGTTGCAGAACTTGGTGGGGAATCTCTCACAAGTTGCATGGCTCGTCAACTTGCTATTAACCAGCAAATGTTCCAGTTACAGCATCAGCAGCCCAACCAGCAGAGACATTTTCTACTGCAAAATCACCAAACTCAGGAAGAGATACAGTCTCGGTCGCAGCAGATTCAAAGCAATGAGTTGCATTCCCAAGCACAGATTCAACGCAATGAGTTGCATCCCCAGCCGTGA 1539 0.4639 MEGVDQRNSAAFGVPVPRPPANQKPGIPPSHPNINVSPSATPYSQYSQRLRSPGSSHSRSLSQPPIFSLDSLPPLSPSPAAAVVTSMFDSISTTDMPMEESNVSSQVPLNRGHALLPPRKGHRRSSSDSPLGISGFTQSSPVPSGGESSGGFEKPIQLVLKASFRDCLDGDRANEPVNERKEETMDDLFREYMNLDNFDNLNFPGMEDKDLDSRTSGSKTVESSDNEVESHVNGKVSGSHGASSSCSEERREGVKRSSNGDVAPSSRHRRSFSLDSSIGNFNIEDGLPKLPRSKNKNCQHSPSNSMDGKVSETSTEFGNGEFSAEEVKKIMESDKLAEIASTDPKRAKRILANRQSAARSKERKTRYIAELEHKVQTLQTETTTLSTQFTKSQRDNSELKSENNEYKLRLQAMEQQSQLKDALNETLDAEVRRLRRAVAELGGESLTSCMARQLAINQQMFQLQHQQPNQQRHFLLQNHQTQEEIQSRSQQIQSNELHSQAQIQRNELHPQP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0238 512 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 38 505 - -
Aed9g0238 512 SMART brlzneu 341 405 IPR004827 GO:0003700|GO:0006355
Aed9g0238 512 PANTHER BZIP TRANSCRIPTION FACTOR 38 505 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 480 512 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 230 244 - -
Aed9g0238 512 SUPERFAMILY Leucine zipper domain 345 401 IPR046347 GO:0003700|GO:0006355
Aed9g0238 512 Coils Coil 361 388 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 1 80 - -
Aed9g0238 512 Gene3D - 345 396 - -
Aed9g0238 512 Coils Coil 420 444 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 28 69 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 127 146 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 259 280 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 95 109 - -
Aed9g0238 512 MobiDBLite consensus disorder prediction 294 319 - -
Aed9g0238 512 Pfam bZIP transcription factor 345 403 IPR004827 GO:0003700|GO:0006355
Aed9g0238 512 MobiDBLite consensus disorder prediction 198 319 - -
Aed9g0238 512 CDD bZIP_plant_RF2 346 418 IPR044759 GO:0003700|GO:0006355
Aed9g0238 512 MobiDBLite consensus disorder prediction 95 154 - -
Aed9g0238 512 Coils Coil 396 416 - -
Aed9g0238 512 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 343 406 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0238 Aed-Chr9 1714374 1718290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0238 26 462 bZIP Transcription Factor Family AT4G38900 46.266 1.01e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed9g0238 bZIP_1 1.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0238 - - gmx:100779731 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0238 9 1714374 1718290 Aed9g0238 9 1714374 1718290 ECH