Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0233 ATGTCAGCGGGAGTTGGAAAATGCAGCAGAATCCGGCACATAGTGAGGCTGCGGCAAATGGTGCGGGGGTGGCGTAGCAAGGCCAGGATGTGGGCGTCGGATGTTCCGGCGGGACACGTGGCGGTGTGCGTGGGGAGAAACTCTCGGAGATTTGTTGTGCGGGCGACGCAGCTGAACCACCCGGCGTTCAAGAAGCTACTTGTTGAGGCGGAGGAAGAGTACGGGTTCTCCAACCACGGCCCTCTCGCCATTCCCTGCGACGAAGCCTTCTTCGAACAACTCCTCCGCTCCGACCTTGACTTCATCTACCACGAATCCCGACCACTACTCATGAATTGA 339 0.587 MSAGVGKCSRIRHIVRLRQMVRGWRSKARMWASDVPAGHVAVCVGRNSRRFVVRATQLNHPAFKKLLVEAEEEYGFSNHGPLAIPCDEAFFEQLLRSDLDFIYHESRPLLMN 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0233 112 Pfam Auxin responsive protein 16 96 IPR003676 GO:0009733
Aed9g0233 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 96 IPR003676 GO:0009733
Aed9g0233 112 PANTHER SMALL AUXIN-UP RNA-RELATED 7 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0233 Aed-Chr9 1661271 1661609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0233 5 95 Calmodulin-binding Proteins AT4G34750 57.732 1.07e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0233 K14488 - gmx:100794795 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0233 9 1661271 1661609 Aed9g0233 9 1661271 1661609 ECH
Aed11g0060 11 446591 447474 Aed9g0233 9 1661271 1661609 PCT