LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed9g0207	ATGGTGCTGCAAAGCACACTGAGTGTTAACATGAAAGGCAATAATACACTTTTGTTGCATTTATTCTGCACTCTCTTGCTGTTTCTTGGAGAGTCAAGGCCATCCACAGGGAATAGTAGAAACGATGACAGTAACAGTAAAGAAGTTTATATCGTCTATATGGGTGCTGCAGATGCTTCTCTTCGGAATGACCACTCTCAGATTCTCAATTCAGTGCTAAATAGGAATGAGAATGCTCTAGTACGGAACTACAAACATGGTTTCTCAGGGTTTGCAGCTCGTCTATCGAAAGAGGAAGCAGACTCAATTGCTCAGAAACCTGGTGTGGTGTCTGTTTTTCCTGACCCCATTTTGAAACTCCACACTACACGTTCATGGGATTTCATTAAAAGGCAAACTCGTGTCAAAATCGACGACACCAAACCAAATACGTTTTCCATTACTTCTTCCTCCACGTCGTCAGACATCATCCTTGGCGTCTTAGACACAGGTATATGGCCAGAGGCGGCAAGTTTTAGCGACGAAGGTTTTGGCCCTGTTCCATCTCGTTGGAAAGGCAGCTGCATGGAATCACAAGACTTCAATTCCTACAAGTGTAACAGGAAGCTAATTGGCGCAAGATTTTACCCTGTCCCTGATGGGAAGAATGGACCGGATGACCTGACACCAAGGGATTCGGACGGACATGGGACCCACGTGGCGTCGACGGCGGTGGGTGTGGTGGTGACTAACATATCGTTCTATGGTCTGGCGCCGGGAACAGCAAAGGGTGGATCCCCCGGGTCAAGATTGGCGGTTTACAAAGTGTGTTATGTGAGTGGATGTCGTGGATCGGCCATTATGGCGGCGTTTGACGATGCCATTGCGGATGGAGTGGATGTGCTGTCGCTTTCGCTGGGTGGAGACCCTTCCTCGCAACCCGACTTGACGACTGACCCGATTGCGATCGGAGCATTCCACGCCGTGGAGCGCGGCATCCTCGTGGTTTGCGCCGCCGGGAATTACGGACCTTACAAGAGCACGGTTACAAACAACGCGCCTTGGATTTTAACCGTTGCAGCTTCCACCATCGACCGGGATCTTCAGTCCAACGTCATCTTGGGTACTAACCAACTCATTCAGGGCAGAGGCATCAATTTCTCCCCTCTTTCAAATTCTCCCAAGTATCCAATGATATCCGGTGCGTCTGCCAAGGCAAAAAGAGCCAACTTAGCTAAAGCAAGCAATCCAGTGGGTACAGTATTAGCAACAGTTGCAGTTCCTGATTATAAGCCTGCTCCCATAGTTATTTACTTTTCATCAAGAGGGCCTTCAACGCTTTCAAGCAATATTCTCAAGCCTGATATTGCAGCACTGGGAGTTAACATTCTCGCTGCATGGATTGGAAATGACACATCAGAGTGTCAAAACACGCAACCCCACTTGGAGTCCCTCTGCAATCAAATCTGCCATCATGACTTCAGGTAA	1467	0.4833	MVLQSTLSVNMKGNNTLLLHLFCTLLLFLGESRPSTGNSRNDDSNSKEVYIVYMGAADASLRNDHSQILNSVLNRNENALVRNYKHGFSGFAARLSKEEADSIAQKPGVVSVFPDPILKLHTTRSWDFIKRQTRVKIDDTKPNTFSITSSSTSSDIILGVLDTGIWPEAASFSDEGFGPVPSRWKGSCMESQDFNSYKCNRKLIGARFYPVPDGKNGPDDLTPRDSDGHGTHVASTAVGVVVTNISFYGLAPGTAKGGSPGSRLAVYKVCYVSGCRGSAIMAAFDDAIADGVDVLSLSLGGDPSSQPDLTTDPIAIGAFHAVERGILVVCAAGNYGPYKSTVTNNAPWILTVAASTIDRDLQSNVILGTNQLIQGRGINFSPLSNSPKYPMISGASAKAKRANLAKASNPVGTVLATVAVPDYKPAPIVIYFSSRGPSTLSSNILKPDIAALGVNILAAWIGNDTSECQNTQPHLESLCNQICHHDFR	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed9g0207	488	Gene3D	Peptidase S8/S53 domain	155	357	IPR036852	GO:0004252\|GO:0006508
	Aed9g0207	488	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	32	121	IPR037045	-
	Aed9g0207	488	PANTHER	CO(2)-RESPONSE SECRETED PROTEASE	404	473	-	-
	Aed9g0207	488	PANTHER	CO(2)-RESPONSE SECRETED PROTEASE	66	400	-	-
	Aed9g0207	488	CDD	Peptidases_S8_3	118	396	IPR034197	-
	Aed9g0207	488	Gene3D	-	358	405	-	-
	Aed9g0207	488	Pfam	Subtilase family	153	470	IPR000209	GO:0006508\|GO:0008236
	Aed9g0207	488	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	229	239	IPR022398	-
	Aed9g0207	488	Pfam	Peptidase inhibitor I9	49	121	IPR010259	-
	Aed9g0207	488	ProSiteProfiles	Serine proteases, subtilase domain profile.	125	488	-	-
	Aed9g0207	488	PRINTS	Subtilisin serine protease family (S8) signature	383	399	IPR015500	-
	Aed9g0207	488	PRINTS	Subtilisin serine protease family (S8) signature	225	238	IPR015500	-
	Aed9g0207	488	PRINTS	Subtilisin serine protease family (S8) signature	153	172	IPR015500	-
	Aed9g0207	488	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	404	473	IPR045051	-
	Aed9g0207	488	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	66	400	IPR045051	-
	Aed9g0207	488	SUPERFAMILY	Subtilisin-like	122	463	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed9g0207	Aed-Chr9	1458068	1461429	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed9g0207	404	446	Subtilisin-like Serine Gene Family	AT1G20160	53.488	9.24e-07	49.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed9g0207	K25898		-	gmx:100781173	611.683