Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed9g0200 | ATGGCTAAAGTCATGTTTGTTTTGGTCAGCTTCCTCGTATTATGCTGTTTCACAGTCAACATTTGCGCCTTCTCACCTTCTGGATGGACCAATGCCCATGCCACTTTTTATGGAGGTGGCGATGCCTCGGGGACAATGGGAGGAGCTTGTGGGTATGGGAATCTGTATTCAACAGGGTATGGGACTAACACAGCGGCATTAAGTACTGCCTTATTTAACGATGGAGGTTCATGTGGAGAGTGTTTTAAAATAATATGCGATTATGAAGCGGACTCGAGATGGTGCTTAAAAGGAACATCCGTAACCATAACCGCCACAAACTTCTGCCCTCCCAATTTTGCTCTTCCCAACAACAACGGAGGGTGGTGCAACCCTCCTCTCAAACATTTCGACATGGCTCAACCCGCTTGGGAACAAATTGGTATCTATAGAGGAGGGATCGTGCCCGTTTTGTTCCAAAGGGTTCCATGCGTGAAGAAGGGAGGGGCTAGGTTCAGTGTGAATGGGAGAGACTACTTTGAGCTTGTACTGATAAGCAATGTGGGAGGGGCTGGATCTATCGAATCTGTGTCCATCAAAGGCTCAAAAACTGGATGGATGACAATGTCAAGAAATTGGGGTGCTAATTGGCAATCCAATGCGTATTTGAATGGACAATCTTTGTCCTTCAGGGTCACAACCACCGATGGTGTTACTAGACTTTTTCAAGATGTTGTTCCATCAAATTGGGGTTTTGGCCAGACTTTCCCAACTAGTGTCCAGTTTTAA | 768 | 0.4596 | MAKVMFVLVSFLVLCCFTVNICAFSPSGWTNAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGGSCGECFKIICDYEADSRWCLKGTSVTITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEQIGIYRGGIVPVLFQRVPCVKKGGARFSVNGRDYFELVLISNVGGAGSIESVSIKGSKTGWMTMSRNWGANWQSNAYLNGQSLSFRVTTTDGVTRLFQDVVPSNWGFGQTFPTSVQF | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed9g0200 | 255 | Gene3D | - | 16 | 157 | IPR036908 | - | |
Aed9g0200 | 255 | Pfam | Lytic transglycolase | 64 | 151 | IPR009009 | - | |
Aed9g0200 | 255 | Gene3D | - | 164 | 255 | IPR036749 | - | |
Aed9g0200 | 255 | SUPERFAMILY | PHL pollen allergen | 159 | 250 | IPR036749 | - | |
Aed9g0200 | 255 | PANTHER | EXPANSIN-A15 | 8 | 255 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 101 | 111 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 120 | 137 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 137 | 150 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 59 | 73 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 208 | 229 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 161 | 173 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 237 | 253 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 88 | 99 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | PRINTS | Expansin signature | 173 | 194 | IPR002963 | GO:0009664 | |
Aed9g0200 | 255 | Pfam | Expansin C-terminal domain | 164 | 240 | IPR007117 | - | |
Aed9g0200 | 255 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 172 | 251 | IPR007117 | - | |
Aed9g0200 | 255 | PANTHER | EXPANSIN | 8 | 255 | - | - | |
Aed9g0200 | 255 | SUPERFAMILY | Barwin-like endoglucanases | 28 | 180 | IPR036908 | - | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 237 | 251 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 46 | 64 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 68 | 86 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 145 | 161 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 28 | 43 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | PRINTS | Expansin/Lol pI family signature | 199 | 213 | IPR007118 | GO:0005576 | |
Aed9g0200 | 255 | SMART | dpbb_1 | 64 | 152 | IPR007112 | - | |
Aed9g0200 | 255 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 47 | 162 | IPR007112 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed9g0200 | Aed-Chr9 | 1420152 | 1421668 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed9g0200 | 64 | 255 | Expansin Gene Family | AT1G20190 | 81.771 | 1.33e-120 | 340 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed9g0200 | - | - | gmx:100792023 | 503.827 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed9g0200 | 9 | 1420152 | 1421668 | Aed9g0200 | 9 | 1420152 | 1421668 | ECH | |
Aed11g0027 | 11 | 181833 | 183283 | Aed9g0200 | 9 | 1420152 | 1421668 | PCT |