Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0185 ATGTATATGGGAGATACAGAGTCTAGCAGTAGTGGAATATTCAATTCAGGATGGAAGCTACTAAGTCCAAAACAGAGACAGAAGGTTGGAGTTTATAACGAGGTTCTATGTAGACTTAGGGAATTGAATATCCCTGAGGCTCTGCTTCCTGCTTTTGAGGATCAGCTTTGGGCTCACTTCTATCGCCTTCCTGCTAGGTATGCATTGGACATGAATGTGGAGAGGGCCGAAGATGTTCTTATGCATAAAAGGTTACTGGACATCGCACGAGCAACCGGACCTGCACTTGAAGTTCGTCTTGTACAGGTTCGTTCTGCTTCTGGTGGTCGTTCTAGTAAATCCCTTCATTCAAACTCACAAAGTAAAGTTTGTCCTGAAGATTCTGGTATTCCAGGCAACACGAGGCATGATTATGTGAATATTTACTTCTTCCATCCTCCCCCGGCCTTCGGTTCGTCAACTAACGTGGAACTTGGTCTTGGCGAGAGCCAGTTAAAAAACCAAGACAGGGATAACTATTTGAATTTTTATGCACATTATGCCCGGCCCATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTCGCTCAGTTGACTTCCTTACTCTCTGAGACTGGGTTGGACATTCAAGAAGCTCATGCTTTTTCAACAATAGATGGCTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAGAAGTTAAAACATGAACTAGCTAAGAAAATTCAGAGACTCCAGCAACTCCAGTTGAAAGAAAATGTGAGTCTTCCTACTGCGAAGCAAGAGCAAACCGGGATGAACTTTATCTGGAGAATTGATGCTGGGTGTTTAAGATATGAAAAGAAAATTGCATCTGGATCTTTCAGTGATTTTAAAATTCAGCACAAGAATGTTGTCAAATTTGTTGGTGCTTGTACAAAACCCCCAAACCTTTACCTTGTCACAGAATACATGTCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAATACTGTCCTTGCTCTTCCATCTTTACTCAAAATAGCCATTGATGTTTCTGAAGGAATGAAATATTTGCATCAGAATGATATCATACATCGAGACCTTAAAGCGGCTAATCTTTTGATAGATGAGAATGGGCTTCCGTATGAGCATTTGTCCCCATTGCAAGCAGCTGTTGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGGCATACTCATCCAAAGTTAGTGGAATTGCTTCAGTGGTGCTGGCACCAAGATTCATCTTTGAGACCCAATTTCTTAGAAATTCTAGAATTTCTGCTGCGTGTGACCAAGACGGTATGTTGA 1344 0.4152 MYMGDTESSSSGIFNSGWKLLSPKQRQKVGVYNEVLCRLRELNIPEALLPAFEDQLWAHFYRLPARYALDMNVERAEDVLMHKRLLDIARATGPALEVRLVQVRSASGGRSSKSLHSNSQSKVCPEDSGIPGNTRHDYVNIYFFHPPPAFGSSTNVELGLGESQLKNQDRDNYLNFYAHYARPMHEITISTNDKPKLLAQLTSLLSETGLDIQEAHAFSTIDGYSLDVFVVGGWAVEETEKLKHELAKKIQRLQQLQLKENVSLPTAKQEQTGMNFIWRIDAGCLRYEKKIASGSFSDFKIQHKNVVKFVGACTKPPNLYLVTEYMSGGSMFDFLHKQNTVLALPSLLKIAIDVSEGMKYLHQNDIIHRDLKAANLLIDENGLPYEHLSPLQAAVGVIQKGLRPKIPRHTHPKLVELLQWCWHQDSSLRPNFLEILEFLLRVTKTVC 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0185 447 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 383 443 - -
Aed9g0185 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Aed9g0185 447 SUPERFAMILY ACT-like 184 253 IPR045865 -
Aed9g0185 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 298 - -
Aed9g0185 447 Coils Coil 236 259 - -
Aed9g0185 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 383 443 - -
Aed9g0185 447 SMART serkin_6 229 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0185 447 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 300 381 - -
Aed9g0185 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 300 381 - -
Aed9g0185 447 SUPERFAMILY Protein kinase-like (PK-like) 280 439 IPR011009 -
Aed9g0185 447 ProSiteProfiles Protein kinase domain profile. 236 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0185 447 MobiDBLite consensus disorder prediction 108 127 - -
Aed9g0185 447 Gene3D Transferase(Phosphotransferase) domain 1 384 446 - -
Aed9g0185 447 MobiDBLite consensus disorder prediction 108 130 - -
Aed9g0185 447 Pfam Protein tyrosine and serine/threonine kinase 300 381 IPR001245 GO:0004672|GO:0006468
Aed9g0185 447 Pfam Protein tyrosine and serine/threonine kinase 384 439 IPR001245 GO:0004672|GO:0006468
Aed9g0185 447 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 10 298 - -
Aed9g0185 447 ProSiteProfiles ACT domain profile. 186 261 IPR002912 -
Aed9g0185 447 Gene3D Transferase(Phosphotransferase) domain 1 297 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0185 Aed-Chr9 1332415 1337905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0185 22 446 MAP Kinase Kinase Kinase AT4G35780 44.030 6.25e-134 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed9g0185 PK_Tyr_Ser-Thr 5.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0185 - - gmx:100818047 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0185 9 1332415 1337905 Aed9g0185 9 1332415 1337905 ECH