Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0151 ATGGAAGCAGAGGGAGTTGGAGGACTTTACGTGAAAGTGATGACCGACGACCAAATGGAACTGCTTCGCCAACAAATATCTGTCTACGCCACCATCTGTGAACAGCTTGTTGAGATGCACAAGGCCGTTACTACCCAACAGGACCTCGCAGGGCTGAGGCTCGGTAATTTCTACTGTGATCCTTTGATGGCGTGCCATGGACACAAGATAACCGCCAGGCAGCGTTGGACTCCAACGCCTCTTCAGCTTCAAAAACTTGAGCGTATTTTCGATGAGGGAAATGGCACTCCCACCAAACAGAAGATCAAAGACATTACCATTGAACTCGGACAACATGGCCAAATATCCGAGACTAATGTTTATAACTGGTTCCAGAACAGAAGGGCTCGTTCTAAGCGCAAACAACTCGCTTCCGCTGCACCCAATGTTAATGTTGTCGACGACCCAGAACTCGAGGACACAGAACTTGTTGACTCTCCAAAAGACAAAAAGACACTATGTAGAGTGAGGCAAGATCTCCCTCTACCTGGAGGGATCTGA 540 0.4833 MEAEGVGGLYVKVMTDDQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNFYCDPLMACHGHKITARQRWTPTPLQLQKLERIFDEGNGTPTKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQLASAAPNVNVVDDPELEDTELVDSPKDKKTLCRVRQDLPLPGGI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0151 179 PANTHER WUSCHEL-RELATED HOMEOBOX 13 4 168 IPR044559 GO:0003700
Aed9g0151 179 SMART HOX_1 71 138 IPR001356 GO:0003677
Aed9g0151 179 ProSiteProfiles 'Homeobox' domain profile. 69 134 IPR001356 GO:0003677
Aed9g0151 179 Pfam Homeodomain 73 133 IPR001356 GO:0003677
Aed9g0151 179 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 4 168 - -
Aed9g0151 179 CDD homeodomain 73 135 IPR001356 GO:0003677
Aed9g0151 179 SUPERFAMILY Homeodomain-like 72 135 IPR009057 -
Aed9g0151 179 Gene3D - 74 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0151 Aed-Chr9 1072753 1074880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0151 9 135 Wox Gene Family AT4G35550 75.591 4.12e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed9g0151 Homeodomain 2.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0151 - - gmx:100820530 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0151 9 1072753 1074880 Aed9g0151 9 1072753 1074880 ECH