Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0147 ATGTATGATTTGGGAGCGACTATGCCTGTTGGAATGGATTTTCCTCCTCCGTTTATTATGTTAGATGACAAAGACAGTGCATTTGTGGTGGAAGATGATGAGAAATCAGGGGATTTGAATAATATAAAACCAATGACAAAGGGTAAGCCTCCGCGGCATGCTTCCGGTTTGAGGCACAGCGTTAGCACCACCAGATTGCTGGCTGTAGCAGATTTGAGTTTGGATGTGGGGGTTACTGGGAGCAAGTCATCTTCTGAAGAAAAGACGGAGTTTCTACCAATATTTCGGTCAGGAAGCTGTGCTGAAAGAGGACCTAAACAATATATGGAAGACGAACACATGTGTATAGATAATCTTATTCAGCATATAGGCCCTGCTTCAACTATTCCTTTACCCGGAGCTTTTTATGGGGTGTTTGATGGACATGGAGGTACAGATGCATCTTTGTTCATAAGAAATAACATCCTCAGATTCATAGTTGAGGACTCCCATTTTCCAACTTGCGTGGGGAAGGCAATTACAAGTGCGTTTTTAAAAGCGGATTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTGACTGCTCTTGTATTTGGAAGGACCATGATAGTTGCCAATGCTGGGGACTGTCGAGCTGTACTGGGGAGACGAGGTAGAGCAGTTGAGATGTCAAAAGACCAGAAGCCAGACAGCATCTCGGAGAGGCTAAGGATTGAGAAACTTGGCGGAGTGGTATACGATGGATACTTGAATGGGCAGTTATCGGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGCTCCAAGGGTTCTGCCTGCCCCTTGAGTGCGGAGCCGGAGCTGCAGGAAATCAACCTGACTGAGGATGATGAGTTCTTGATCATGGGCTGCGACGGCCTATGGGATGTAATGAGTAACCAATGTGCTGTAACAATGGCAAGGAAAGAATTGATGATACATAATGACCCTCAAAGGTGTTCAAGAGAGCTGGTCAGAGAGGCTCTTAAGCGCAACTCGTGTGATAATTTGACAGTTATTGTCATATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGGTGTACTGGACTGTTAG 1170 0.4581 MYDLGATMPVGMDFPPPFIMLDDKDSAFVVEDDEKSGDLNNIKPMTKGKPPRHASGLRHSVSTTRLLAVADLSLDVGVTGSKSSSEEKTEFLPIFRSGSCAERGPKQYMEDEHMCIDNLIQHIGPASTIPLPGAFYGVFDGHGGTDASLFIRNNILRFIVEDSHFPTCVGKAITSAFLKADYAFADSSSLDISSGTTALTALVFGRTMIVANAGDCRAVLGRRGRAVEMSKDQKPDSISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGSKGSACPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETPPSRVRRSISAEGLNLLKGVLDC 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0147 389 CDD PP2Cc 95 356 IPR001932 -
Aed9g0147 389 SMART PP2C_SIG_2 111 356 IPR001932 -
Aed9g0147 389 MobiDBLite consensus disorder prediction 34 56 - -
Aed9g0147 389 Gene3D - 74 359 IPR036457 -
Aed9g0147 389 ProSiteProfiles PPM-type phosphatase domain profile. 96 356 IPR001932 -
Aed9g0147 389 SUPERFAMILY PP2C-like 90 357 IPR036457 -
Aed9g0147 389 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 8 378 - -
Aed9g0147 389 Pfam Protein phosphatase 2C 97 348 IPR001932 -
Aed9g0147 389 PANTHER PROTEIN PHOSPHATASE 2C 8 378 IPR015655 GO:0004722|GO:0006470
Aed9g0147 389 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Aed9g0147 389 SMART PP2C_4 86 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0147 Aed-Chr9 1029760 1033729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0147 10 388 PP2C-type Phosphatase Gene Family AT2G33700 69.713 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0147 K14803 - gmx:100778015 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0147 9 1029760 1033729 Aed9g0147 9 1029760 1033729 ECH