Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0146 ATGAATTTGTATTGGGTTGTGATTTGTTGGTTTGTGGCGGCTGCAAATGCGTCGTCATCCTCAAGACCTGCCGTTGTCAACATTGGAGCAATCTTCAACATCGATTCCATTCTCGGGAAAGTTTCTAAAATTACCTTGGAGGAAGCCGTCAAAGATGTCAACGCCGACAATACCATTCTACATGGAACTAAACTTGCTCTCACTATGCAGAATTCCAATTACAGTGGTTTCATAGGCATGGTTCAAGCTTTGCGTTTCATGGAGAGTGATGTGATTGCTATAATAGGGCCGCAATCTTCTGTGTCTGCCCACATAATATCCCATGTTGCAAATGAACTCCGTGTTCCTTTAGTGTCATTTGCCGCAACAGACCCAACACTCTCATCGCTGCAATTCCCTTTCTTCGTTAGGACAACACAGAGTGATTTGTACCAAATGAAGGCAGTTGCTGAAATCATTGATTATTATGGTTGGAAGGAGGTCATTGCCATATATGTTGATGATGATTATGGCCGAAACGGTGTGGCTGCATTGGATGATGAACTCGCTGCCAGGCGCTGTAGTATCTCTTTCAAGGAAGGGATTAACTCCGGAACTCAAGTTGACCGCGGCGAAATTACTAATTTGCTTGTGAAAGTGGCACTGATGCAATCTCGGGTCATTGTTCTCCATGCTCAAACTGATTCTGGATTTATGGTTTTCAATGTGGCGCATGATCTAGGGATGACAGGCAATGGCTATGTGTGGATAGTCACAGACTGGCTCTCTTCTCTTCTGGATTCCTCTTCTCTCCCTTCAGATACAATGGATGTTCTCCAAGGAATACTTGTTTTGCGCCAGCATACACCTGATTCGGATAGAAAAGGGGCATTTCTCTCTAGGTGGAAGAACTTAACTGGTGCCTCTTTGGGGTTACATTCTTATGGTCTCTATGCTTATGATTCTGTTTGGCTGGTTGCACGGGCTATTGATGCTTTCTTCACTCAGGGTGGGGTTGTTTCGTGTACCAATTACACAAGTTTAGGTGGTGATCTTAACCTCGATGCAATGGGCATTTTTGACAATGGAACGCTTCTGTTGAAGAACATACTACAGAGTGATTTTGTTGGATTATCAGGTCGAATGAAATTTGAACCAGACCGGTCTCTTGTTCATCCTGCTTATGACGTCCTTAATGTGGTTGGAAATGGCCTTAGGAGGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCAACTGTGTCTCCTGAGATGTTGTATGCAAAGCCACCTAATAGATCAAGTGCAAACCAAAGGCTGTACAGTGTGCTATGGCCTGGAGATACATTATCTAAACCCCGTGGGTGGGTCTTCCCAAACAATGGTAGACAATTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCGTGAATTTGTGGCACCAGTGAAGGGAACAGAGACGTTTAAAGGATTCTGTGTTGATGTATTCACAGCAGCTGTAAACTTGTTGCCTTATGCTGTTCCTTACCGTTTTGTCCCATTTGGAGATGGCCTAAAAAATCCAAGTTACACACAACTTGTCAACTTAATATCAACTGGTTTGGTTAATTCATTCATTTCCTTGGCGCAGTACTTTGATGCCGCCATTGGTGACATTGCTATTGTCACAAATCGGACAAGGATTGTAGATTTTACACAGCCATATGCTGCATCTGGACTTGTTGTTGTGGCCCCTTTCAAGAAAATCAATTCTGGTGGTTGGTCTTTCCTGCAGCCATTTACTCCTCTTATGTGGATTGTGACTGCTTGTTTCTTCCTTTTCATTGGGATAGTTATATGGATTCTGGAACACAGGATAAATGATGAGTTCAGGGGTCCACCTAGGCAGCAAATTATAACCATGTTGTGGTTTAGCCTATCAACTCTGTTTTTTTCCCACAGAGAGAATACCATGAGTTCTCTTGGTCGGTTGGTGATGCTCATATGGTTATTTGTGGTTTTGATCCTCACTTCCAGCTACACTGCAAGTTTAACATCCATACTCACAGTGCAGCAGTTATATTCTCCTATCACTGGAATAGAGAGCTTAAAAGCCAGTGATGAACCTATAGGGTTCCAAGTGGGTTCATTTGCAGAACATTACTTGATTCAAGATATTGGAATAGCCAAATCTAGGCTTATCCCCCTTGGATCTCCAGAAGAATATGCTAAGGCACTCCAGCTTGGTCCTAAAAGAGGAGGTGTTGCTGCTATTGTTGATGAACGACCCTATATCGAAATCTTCTTATCAAGCCAGTGCACATTCAGGATTGTAGGTCAGGGAGAGTTCACTAGAAGTGGCTGGGGTTTTGCATTCCCTCGGGACTCTCCTTTGGCTGTAGAAATGTCAACTGCCATTCTACAACTTTCTGAAACTGGTGATCTACAGAGGATTCATGATAAGTGGATGACACGAAGCTCTTGTAGTTTAGACAACGCTGAAATTGATTCAGATCGTCTTCAGCTTAAAAGCTTCTGGGGTCTCTTTCTCATTTGCGGGATAGCTTGCTTTATTGCTCTTGTTTTGCATTTTGTGCAGCTTATGTTCCAGTCATGGAAATCTCCACCTTCTCAACCTGCTTTGAGTGCTAGCTCAATTTCTGGTCGTTTTCAAAGATTTCTTACACTCATTGATGAGAAGGAAGATCCGTCAAAGAGTAAAGGAAGAAAGAGGAACGGAGATGAAAGAACGCTTGAAGATCAACTGGGAAGGCAGCCAAAGAGGATACAGACAGAAATAACGGCCAACTCAAACAATTAA 2775 0.4314 MNLYWVVICWFVAAANASSSSRPAVVNIGAIFNIDSILGKVSKITLEEAVKDVNADNTILHGTKLALTMQNSNYSGFIGMVQALRFMESDVIAIIGPQSSVSAHIISHVANELRVPLVSFAATDPTLSSLQFPFFVRTTQSDLYQMKAVAEIIDYYGWKEVIAIYVDDDYGRNGVAALDDELAARRCSISFKEGINSGTQVDRGEITNLLVKVALMQSRVIVLHAQTDSGFMVFNVAHDLGMTGNGYVWIVTDWLSSLLDSSSLPSDTMDVLQGILVLRQHTPDSDRKGAFLSRWKNLTGASLGLHSYGLYAYDSVWLVARAIDAFFTQGGVVSCTNYTSLGGDLNLDAMGIFDNGTLLLKNILQSDFVGLSGRMKFEPDRSLVHPAYDVLNVVGNGLRRVGYWSNYSGLSTVSPEMLYAKPPNRSSANQRLYSVLWPGDTLSKPRGWVFPNNGRQLRIGVPIRVSYREFVAPVKGTETFKGFCVDVFTAAVNLLPYAVPYRFVPFGDGLKNPSYTQLVNLISTGLVNSFISLAQYFDAAIGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPLMWIVTACFFLFIGIVIWILEHRINDEFRGPPRQQIITMLWFSLSTLFFSHRENTMSSLGRLVMLIWLFVVLILTSSYTASLTSILTVQQLYSPITGIESLKASDEPIGFQVGSFAEHYLIQDIGIAKSRLIPLGSPEEYAKALQLGPKRGGVAAIVDERPYIEIFLSSQCTFRIVGQGEFTRSGWGFAFPRDSPLAVEMSTAILQLSETGDLQRIHDKWMTRSSCSLDNAEIDSDRLQLKSFWGLFLICGIACFIALVLHFVQLMFQSWKSPPSQPALSASSISGRFQRFLTLIDEKEDPSKSKGRKRNGDERTLEDQLGRQPKRIQTEITANSNN 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0146 924 PIRSF IGluLR_plant 1 924 IPR017103 -
Aed9g0146 924 Gene3D - 452 576 - -
Aed9g0146 924 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 10 919 - -
Aed9g0146 924 PANTHER GLUTAMATE RECEPTOR 3.3 10 919 - -
Aed9g0146 924 Gene3D - 141 410 - -
Aed9g0146 924 MobiDBLite consensus disorder prediction 883 911 - -
Aed9g0146 924 CDD GluR_Plant 455 807 - -
Aed9g0146 924 Pfam Receptor family ligand binding region 48 395 IPR001828 -
Aed9g0146 924 SUPERFAMILY Periplasmic binding protein-like I 20 449 IPR028082 -
Aed9g0146 924 SMART GluR_14 458 810 IPR001320 GO:0015276|GO:0016020
Aed9g0146 924 Gene3D - 739 773 - -
Aed9g0146 924 PRINTS Metabotropic glutamate GPCR signature 161 178 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed9g0146 924 PRINTS Metabotropic glutamate GPCR signature 145 161 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed9g0146 924 PRINTS Metabotropic glutamate GPCR signature 126 145 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed9g0146 924 PRINTS Metabotropic glutamate GPCR signature 94 120 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aed9g0146 924 MobiDBLite consensus disorder prediction 883 924 - -
Aed9g0146 924 CDD PBP1_GABAb_receptor_plant 27 413 IPR044440 -
Aed9g0146 924 Gene3D - 577 705 - -
Aed9g0146 924 SUPERFAMILY Periplasmic binding protein-like II 433 810 - -
Aed9g0146 924 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Aed9g0146 924 Pfam Bacterial extracellular solute-binding proteins, family 3 537 809 IPR001638 -
Aed9g0146 924 Gene3D - 45 385 - -
Aed9g0146 924 Gene3D - 774 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0146 Aed-Chr9 1020046 1024568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0146 18 899 Ion Channels AT1G42540 63.322 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0146 K05387 - gmx:102661260 1647.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0146 9 1020046 1024568 Aed9g0146 9 1020046 1024568 ECH