Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0135 ATGTTGGCAATGGAAGAGGTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAGCAAGGCCTGCCACCGGGTTTCAGGTTTCACCCCACTGATGAAGAACTTATAACCTTTTACTTAGCTTCAAAGGTCTTTAATGGAAGCTTCACTACTACTGTCAAGTTTGCTGAGGTTGACCTCAATAGATGTGAGCCTTGGGAACTTCCAGTTAGAGAGACCGAGGAGTGGGTGATATGCAGGATATTTCATAAATCTGGGGAAAAGAGAACTCCACTGCTCCAAGTCCAAGGACATAATTCTTCGGATCCACTACTTTCAAGCCCAACTTGCTTTACATTGGAACTAGAATCTCAATCCCAATTAACCCCGGTTCTGATTAACCACCACCAAGATCAAAATGACCTATCTCACCCTCATATTTTCTCACTGCCAAAAGAAATCTCTAACGCCAGAAACCATCCAACATTTTCTGACCTATTCTTCAAGCCCGGCGGCCTCCAACTACAACAAAATTGCACCCAGAAGACCAATAAGGATCAAAATCATCAAACTATTCCAAAATTAGTAACCAAAACGGAGGACAGTACATCCTTCTATAATGAATATCAATATCATTATCATCAATTACTAGATGATGACCCTAATAACAATATGCGGTGGGTGAACAAGTTGAATCATGAGGTGGATGCTGCTGCAAATGCACAAGTTAGGGACATGTCCACTTCAACACCCTTTCATAGGATAGGCTTGCTGCACCAGGTGCTAGATTCTTGCCCTCTGCCCCAGCGTGTTTAA 798 0.4261 MLAMEEVLCELSDHEKRNEQQGLPPGFRFHPTDEELITFYLASKVFNGSFTTTVKFAEVDLNRCEPWELPVRETEEWVICRIFHKSGEKRTPLLQVQGHNSSDPLLSSPTCFTLELESQSQLTPVLINHHQDQNDLSHPHIFSLPKEISNARNHPTFSDLFFKPGGLQLQQNCTQKTNKDQNHQTIPKLVTKTEDSTSFYNEYQYHYHQLLDDDPNNNMRWVNKLNHEVDAAANAQVRDMSTSTPFHRIGLLHQVLDSCPLPQRV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0135 265 Gene3D NAC domain 32 74 IPR036093 GO:0003677|GO:0006355
Aed9g0135 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 74 213 - -
Aed9g0135 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 12 70 - -
Aed9g0135 265 Pfam No apical meristem (NAM) protein 24 77 IPR003441 GO:0003677|GO:0006355
Aed9g0135 265 ProSiteProfiles NAC domain profile. 23 163 IPR003441 GO:0003677|GO:0006355
Aed9g0135 265 SUPERFAMILY NAC domain 19 70 IPR036093 GO:0003677|GO:0006355
Aed9g0135 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 70 - -
Aed9g0135 265 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 74 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0135 Aed-Chr9 940558 942457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0135 1 70 NAC Transcription Factor Family AT1G76420 71.429 5.12e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed9g0135 NAM 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0135 - - gmx:100780313 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0135 9 940558 942457 Aed9g0135 9 940558 942457 ECH