Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0133 ATGAGCATGTCGGGATCTGAGCAATTCACGGTTGGGATGCACAATCCCCAACCCCAACTTCAACCCCAACAACAACCTCAGCTTCATCAAAACATGCGGATGGACTTTGCTGCTGACGACGACGGCACCGATGTTTTTGCGCCTCTTACTGTTAACATGAACGGCGGAGAATCATCTCCAGCGGTGCCTCCGGGCCTGGCCCAGCCTCAGCCACAGCCCCAGTCCATGATGGTTATCTCATCATCTGAACAAGTCAAGAGAAAGAGGGGAAGGCCCAGGAAATATGGGTCTGACGGTGGCATGGCCTTGGCTTTGACCACCACTCCTCCTGGCGGCGCCGCCATGCCGGTTGGTCAAGCCGGTGGAGCATTTCCTACGGTGCCTCTTTCAGATTCTGCCTCAGCTGGTACCGGGAAGCGCAGGGGCAGGCCTCGTGGTTCTGTCAACAAGATTAAGAAGAATAGCTCCTCATACTCAAAGTATTCTGGGCCAGGATCTTGGTTTACACCGCATGTCATTACGGTGAAAGCTGGAGAGGATCTGTCAGCAAGAATTATGGCAATTTCCCAGAGTAGTCCAAGAAATATTTGCATCCTAACGGCAAATGGAGCCATATCTAATGTGACACTTCGGCAACCTGCCTCATCTGGTGGAACTGTGACTTATGAGGTTCATAAACGTCCTAGCAACTTTTCTTTTTGTCCCCTTCCCATAACCTCGTCTTCAAGCCTAAATAATATATACCAGTTCTTAGATCTGTCAATTATTTTGGGCGATTTGAGATCCTATCACTTGGTGGTTCTTTTTATTGCTGGAACTGAAAGGGCTGGGGGGCTGAGTGTGTCCTTGTCAGGGCCAGATGGCCGTGTCTTGGGCGGCGGAGTTGCAGGTCTTTTGATAGCTGCTTCCCCTGTTCAGATTGTTTTGGCGAGCTTTGTTTCTGATGTTCGCAAGCACTTCAAGGCCGCAAAGAAGATGAAAAAAGCATCTGCTGCCCAAGCAAAGGTTGCCATAGCAGCAGGGCAAAGCAGCTCACCATCAAGGGGAACTATGAGTCTTAGTGAGTCTTCAGGTGGGGTTGGGAGTGGGAGCCCAATAAACCAAAGCACAGGAGCATGCAACAACAACAGTGCCCCAACACAAGAAGGCTTTCAAGGCATCCCCTGGAAGTAA 1173 0.5055 MSMSGSEQFTVGMHNPQPQLQPQQQPQLHQNMRMDFAADDDGTDVFAPLTVNMNGGESSPAVPPGLAQPQPQPQSMMVISSSEQVKRKRGRPRKYGSDGGMALALTTTPPGGAAMPVGQAGGAFPTVPLSDSASAGTGKRRGRPRGSVNKIKKNSSSYSKYSGPGSWFTPHVITVKAGEDLSARIMAISQSSPRNICILTANGAISNVTLRQPASSGGTVTYEVHKRPSNFSFCPLPITSSSSLNNIYQFLDLSIILGDLRSYHLVVLFIAGTERAGGLSVSLSGPDGRVLGGGVAGLLIAASPVQIVLASFVSDVRKHFKAAKKMKKASAAQAKVAIAAGQSSSPSRGTMSLSESSGGVGSGSPINQSTGACNNNSAPTQEGFQGIPWK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0133 390 MobiDBLite consensus disorder prediction 80 101 - -
Aed9g0133 390 MobiDBLite consensus disorder prediction 342 383 - -
Aed9g0133 390 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 18 223 - -
Aed9g0133 390 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 274 388 - -
Aed9g0133 390 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Aed9g0133 390 SMART AT_hook_2 138 150 IPR017956 GO:0003677
Aed9g0133 390 MobiDBLite consensus disorder prediction 342 390 - -
Aed9g0133 390 CDD DUF296 169 312 IPR005175 -
Aed9g0133 390 ProSiteProfiles PPC domain profile profile. 162 333 IPR005175 -
Aed9g0133 390 MobiDBLite consensus disorder prediction 125 160 - -
Aed9g0133 390 MobiDBLite consensus disorder prediction 1 31 - -
Aed9g0133 390 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 18 223 IPR039605 GO:0003680
Aed9g0133 390 MobiDBLite consensus disorder prediction 1 32 - -
Aed9g0133 390 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 313 IPR005175 -
Aed9g0133 390 Gene3D - 170 333 - -
Aed9g0133 390 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 274 388 IPR039605 GO:0003680
Aed9g0133 390 SUPERFAMILY AF0104/ALDC/Ptd012-like 166 315 - -
Aed9g0133 390 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0133 Aed-Chr9 920754 925895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0133 77 390 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 45.794 8.12e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0133 - - gmx:100808432 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0133 9 920754 925895 Aed9g0133 9 920754 925895 ECH