Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0127 ATGATCATCATGAGGCATGCTTACAACAACAACGACGGAGATCATGGTGCCTCCTCCACCGGACCCCGTCCTCGAGGCCGGCCCCAGGGCTCCAAGAACAAGCTCAAGCCGCCCCTCATTGTCACGCGCGACAGCCCTAGCGCTCTCCGCTCGCACGTGCTAGAGGTCTCCCCCGGCGCCGACGTTGTGGAGAGTCTCTCCAACTACGCGCGCCGCCGAGGGAGGGGCGTGTGCGTGCTCAGCGGCTCCGGCACGGTGAGCAACGTGGCGCTCCGTCAGCCGGCCGGGAGTGTCATCACGCTCCATGGGCGGTTCGAGATAGTTTCCATGACGGGGACGGTGCTTCCGCCGCCTGCGCCGGCGGGATCGGACGGGTTGTCGGTGTATTTTTCGGGGGCGCAGGGACAGGTGGTTGGGGGCGTGGTGGTGGCACCTCTGGTTGCTTGCAGTGACGTGGTGTTGGTGGCTGCTTCCTTTGCTAACGCCATGTTCGAAAGGTTACCCTTGCCTTTGAATGATGATCAAGTGGTACCAGCACCACGTGGCGTCATGGGAACTGGACAGGTGGCAGATGGAAGGAACTATCCCTTCTCGGCCGCGTCGCTGCCACCCAAACCTCATCAGCCTTAA 630 0.627 MIIMRHAYNNNDGDHGASSTGPRPRGRPQGSKNKLKPPLIVTRDSPSALRSHVLEVSPGADVVESLSNYARRRGRGVCVLSGSGTVSNVALRQPAGSVITLHGRFEIVSMTGTVLPPPAPAGSDGLSVYFSGAQGQVVGGVVVAPLVACSDVVLVAASFANAMFERLPLPLNDDQVVPAPRGVMGTGQVADGRNYPFSAASLPPKPHQP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0127 209 Gene3D - 49 173 - -
Aed9g0127 209 Pfam Plants and Prokaryotes Conserved (PCC) domain 50 160 IPR005175 -
Aed9g0127 209 MobiDBLite consensus disorder prediction 184 209 - -
Aed9g0127 209 CDD DUF296 50 131 IPR005175 -
Aed9g0127 209 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 175 IPR014476 GO:0003680
Aed9g0127 209 ProSiteProfiles PPC domain profile profile. 46 180 IPR005175 -
Aed9g0127 209 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 13 175 - -
Aed9g0127 209 PIRSF ESCAROLA 4 203 IPR014476 GO:0003680
Aed9g0127 209 MobiDBLite consensus disorder prediction 6 41 - -
Aed9g0127 209 SUPERFAMILY AF0104/ALDC/Ptd012-like 47 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0127 Aed-Chr9 900174 900803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0127 17 169 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 70.122 2.97e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0127 - - gsj:114413988 296.975