Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0126 ATGGAGGATGGTGAGAAACCCACGGGTAGCTCCCATGGCATTGCTGATATGGATGTTGTTGATGCCGCTTTGCAAAGCCAACGTGTGACTTCTCCTCCTACTCAGCTACAACAGGGTGATGTTAACAAAAACGGCAATTCTGATCCTGGTCATGTACCAGAAACCAGTGTAATTAGCCATAATCACTTTGAAGTTGTTGAAGATGCTAAGACTGTTTCGCATCAGGAACTTATCACTCCAAAGCCTAAAGAAAAGAACGTCAGAGAAATGAAGAATGTGCTAAATGATACTGAGATGACTGATTATGATGAGTATGGCACGCCTCTGGATCGAGAAACATTTATGAAAGAGATTGAGACTTTCTACAGAGAGCGGTCGTTGGAATTTAAGCCTCCTAAGTTTTATGGGGAGCCACTAAATTGCCTTAAGTTGTGGAGAGCTGTTATCAGACTAGGCGGCTATGATGTGGTAACTGGATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCACCCCCCAAAGACCTGCACTACAGTCTCATGGACATTTAGAATTTTTTATGAAAAGGCACTTTTAGAGTATGAAAAACATAAGAGAGAGATTGGAGAGCTACAGCTCCCTGTTGGATCATTCCATCAATCTTCAAATGTGGAAAAAGAGCCTGCTGTTTACCAGACTCCAGGCTCAGGTAGAGCCCGAAGGGATGCTGCAGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTCTTGGATACGGTGAGGTTGCTGAGCCAGTTATTAAGGACAAGAACTTCAGTTCCACACCAAAGCGTGAAAAGAACCTAAGAAGTATTGGTATGATTAATAAACAGAGGACACCATCTGGTCTGGAGCATGCTGAGAAAGCTGCAAATATTGAAGGAGATCGACAATTGATCACAGCGGTAGTGGACATTGGACCCCCAGCTGACTGGGTGAAGATCAATGTGCGGGAAACTAAGGATTGTTTTGAGGTGTATGCCCTAGTTCCTGGGCTCCTTCGTGAGGAGGTGCGAGTCCAATCAGATCCAGTTGGACGTCTTGTTATAACTGGTCTGCCAGAACACATTGACAATCCATGGGGAATCACCCCCTTCAAAAAGGTAGTGAACTTACCTACAAGAATTGATCCGCTTCAGACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTGCGCGTTCCTTTTGAGCAGGGAACTGTGTGA 1227 0.4523 MEDGEKPTGSSHGIADMDVVDAALQSQRVTSPPTQLQQGDVNKNGNSDPGHVPETSVISHNHFEVVEDAKTVSHQELITPKPKEKNVREMKNVLNDTEMTDYDEYGTPLDRETFMKEIETFYRERSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSFHQSSNVEKEPAVYQTPGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNFSSTPKREKNLRSIGMINKQRTPSGLEHAEKAANIEGDRQLITAVVDIGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEHIDNPWGITPFKKVVNLPTRIDPLQTSAVVSLHGRLFVRVPFEQGTV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0126 408 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 307 408 IPR002068 -
Aed9g0126 408 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 49 405 - -
Aed9g0126 408 MobiDBLite consensus disorder prediction 1 52 - -
Aed9g0126 408 CDD ACD_sHsps-like 322 402 - -
Aed9g0126 408 MobiDBLite consensus disorder prediction 24 52 - -
Aed9g0126 408 Gene3D - 308 407 IPR008978 -
Aed9g0126 408 SUPERFAMILY ARID-like 96 205 IPR036431 GO:0003677
Aed9g0126 408 Gene3D - 109 206 IPR036431 GO:0003677
Aed9g0126 408 SUPERFAMILY HSP20-like chaperones 316 403 IPR008978 -
Aed9g0126 408 CDD ARID 110 195 - -
Aed9g0126 408 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 49 405 IPR045147 GO:0006357
Aed9g0126 408 SMART bright_3 109 200 IPR001606 GO:0003677
Aed9g0126 408 ProSiteProfiles ARID domain profile. 108 199 IPR001606 GO:0003677
Aed9g0126 408 Pfam ARID/BRIGHT DNA binding domain 111 195 IPR001606 GO:0003677
Aed9g0126 408 SMART ARID_2 105 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0126 Aed-Chr9 892361 897964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0126 79 405 ARID Transcription Factor Family AT1G76510 69.207 3.61e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aed9g0126 ARID 4.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0126 - - gmx:100797486 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0126 9 892361 897964 Aed9g0126 9 892361 897964 ECH