Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0115 ATGGCGGCATCCACCACCTCCAGCGGCGGTGCGCTGCCGGAGCTGACTAACCGAACTCTCTTTCTCGGGCTCAAACTCTACGTCCTAGTCCTCATTGTATTTGTATTTGTAATTGTCATCGCAACGGTGGTCCTGATCCTCGTCTGCGTTCGCCGGAGTTCGAAGAAGCGGAAAATGCGAGTAAAGCACAGCTCCGGCGCGATCCCACTGGTCTCGAAGGAGATCGTGGAGGTGAATACTTTGGAGCTCAAAATTGAAGAGGTGGATCCGAAGAAGAATGAGACGGAGATGGAAGAGAGTGCGTCGGTGGAGTCGTCGAACATAGGGTGGGGACGATGGTATAGCCTCAAGGAGCTTGACAATGCCACTGAAGGATTTGCAGAAGCGAATGTGATCGGAGAAGGAGGCTATGGGATTGTCTTCAAAGGACTTCTCATGGATGGTTCTGTCGTCGCTGTCAAAAATCTTCTCAACAACAAGGGTCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGACATAAGAATTTGGTGGGGTTAGTTGGATATTGCGCAGATGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGATGTAGGACCTGTTAGCCCCTTGACATGGGATGTAAGAATGAAGATTGCTGTTGGGACTGCAAAAGGATATGTTTCACCTGAGTATGCAAGCACTGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTCGGGATTCTACTAATGGAGCTAATTACAGGAAGGAGTCCCATTGACTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAAGGAATGGTTGCAAGTCGACGTGGCGATGAGCTAGTTGATCCTTTGATAGATATTCAGCCCTCTCAAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGACTTGGATGTCAATAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCTGATGATTTTCCCTTTCGTTCTGAAGTTCGAACAAATCGAGAGAAAAATCATGTTTATTCTAAAGCAGCTGCTTCTGCCACCGCCAGTAAGATTCCATATCCAACAAGGCATAATATTGTGGAGCCACAAGATAAATCAAGCTGGAGATGA 1176 0.4634 MAASTTSSGGALPELTNRTLFLGLKLYVLVLIVFVFVIVIATVVLILVCVRRSSKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIEEVDPKKNETEMEESASVESSNIGWGRWYSLKELDNATEGFAEANVIGEGGYGIVFKGLLMDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCADGAQRMLVYEYVDNGTLEQWLHGDVGPVSPLTWDVRMKIAVGTAKGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRRGDELVDPLIDIQPSQRSLKRALLVCLRCIDLDVNKRPKMGQIVHMLEADDFPFRSEVRTNREKNHVYSKAAASATASKIPYPTRHNIVEPQDKSSWR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0115 391 ProSiteProfiles Protein kinase domain profile. 126 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g0115 391 PANTHER OS03G0227900 PROTEIN 96 236 - -
Aed9g0115 391 PANTHER OS01G0323000 PROTEIN 96 236 - -
Aed9g0115 391 PANTHER OS01G0323000 PROTEIN 236 358 - -
Aed9g0115 391 PANTHER OS01G0323000 PROTEIN 15 94 - -
Aed9g0115 391 PANTHER OS03G0227900 PROTEIN 236 358 - -
Aed9g0115 391 PANTHER OS03G0227900 PROTEIN 15 94 - -
Aed9g0115 391 Pfam Protein tyrosine and serine/threonine kinase 130 236 IPR001245 GO:0004672|GO:0006468
Aed9g0115 391 Pfam Protein tyrosine and serine/threonine kinase 237 340 IPR001245 GO:0004672|GO:0006468
Aed9g0115 391 SUPERFAMILY Protein kinase-like (PK-like) 109 346 IPR011009 -
Aed9g0115 391 Gene3D Phosphorylase Kinase; domain 1 84 201 - -
Aed9g0115 391 Gene3D Transferase(Phosphotransferase) domain 1 232 362 - -
Aed9g0115 391 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0115 Aed-Chr9 812694 816288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0115 113 358 Trihelix Transcription Factor Family AT5G38560 34.810 7.99e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aed9g0115 PK_Tyr_Ser-Thr 1.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0115 - - vra:106762137 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0115 9 812694 816288 Aed9g0115 9 812694 816288 ECH