Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0114 ATGGGCTTAGTGTGGTTCGGGTTTTTCTTCTTGTTGGTGCTGCTGAGTCAGGTGAAGGTGACATTGGAGCAGCAGCAGCAGATTGAGCCATTGAGTTCCGCTGAGGAGCGTGAATCGTTGCTCGAACTAAGGGCTTCTCTGGGGCTGAGGAGCAAGGAGTGGCCAAGAAAACCAGACCCTTGTTTAATCTGGACTGGCATCACGTGTCAGAATGGTCGAGTCGTTGGGATCAATATCTCTGGGTTTAGAAGAACACGACTTGGGAGGAGGAACCCTCAATTTGCAGTGGACCCTTTGGCCAATTTCACCCTCTTGCACACCTTCAATGCCTCCAATTTCCTCCTTCCTGGCCCTATTCCTGATTGGTTTGGTATCTCTCTCCCTTCCCTTAGAGTGCTTGATCTTCGTTCTTGCTCCATTGTTAATGCTATTCCCTCCACCCTCGGCAATTTAACCAACCTCACCACTCTCTATCTCTCTGACAACAACCTCACTGGGAATGTTCCTCAGGCTTTGGGTCAACTCTTGGCCCTTTCGGTTCTTGATCTTTCCAGGAATTCTCTCACTGGCTCCATACCAACCTCTTTTGCCTTTCTTGCTAATCTTTCCTCCCTTGACATGTCTGCTAATTTTTTGTTGGGGCTGATTCCCACCGGCATAGGGACTCTTTCCAGGTTGCAGTACTTGAATCTTTCCAACAATGGCCTTGCTTCTTTGCCTGCCCAATTGGGGGGTCTTGCTAGCTTAGTTGACCTTGATCTTAGCCAGAATTCTTTTGCCGGTGGTGGACTGCCTCAGGATTTGACCGGGTTGAGGAACTTGAAGAGGGTGATACTCGCTAACAGCATGCTCACTGGAGTTCTGCCGGGGGGGTTGTTTAGTGGTTCGTTGCAGTTGCAGTTCCTAGTGCTGAGGCAAAACAATTTTAGTGGTTCTTTGCCTGCTGAGTTGTGGTCTCTGCCAAGATTGAGCTTCCTTGATGTGTCTGCCAATAACTTCAGTGGCCTGCTTCCTAATTCGAGTTCTGCTGCTAATAATGCTACTGTTGCGGTGCTCAATATTTCGCATAATAAGTTTTATGGAGGCCTCACTCCTGTGTTCAGAAGGTTTGGTTTCGTTGATCTTTCAAGCAATTATTTTGAGGGCAAGGTTTTGGATTTCATGCATAATGTATCTCTAGATATCAACTGCCTCCAGAACGCGACAAATCAGAAGTCAGCGGTGGAATGTGCATCATTTTATGAAGAGAGGGGGCTCAGTTTTGACAATTTTGGTCACCCGAATATGACAAAACCTCCCTTTTCCGGAAGCTCTGGGAAGAGCAATAAAACTAAGATTATATTGGCAGCAGTCTTAGGTGGAGTGGGTTTAATTGCGCTTTTGGTGTTGCTACTGGTTCTGTTGTTTCTGTGTGCTCGTAAGAGGGGTAATTCAAATCAGAGAGGAAATGGTGTGGGTCCTGCACCCGTTGGCAGCAGTCCTCCAAATCCTGGTGTGCCAGTCGACTTTCCAAATGTTGGAGACTCATTTACATATCATCAGTTGCTCCAGGCAACAGGAGATTTCAATGATGCAAATCTTATCAAACATGGACACACTGGGGATTTCTTCAATGGTGTTTTGGAAAGTGGGATTCCTGTTGTCATCAAAAGGATCGACATGCGTTCAACTAAAAAGGAGGCTTACCTGTTGGAAATGGACTTCTTCAATAAGGTTTCTCATCAAAGATTTGTTCCTTTGTTAGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACACATGCCAAATGGGGACTTGTCTAATTGCTTGTACTACAAAAACACCACATCTGAAGATGGTACTTTGCAATCATTGGACTGGATAACTAGGTTAAAAATTGCTACTGGAGCAGCAGAGGCCCTATCATATCTACATCATGAATGTGTTCCGCCCATTGTTCACAGAGATATTCAAGCAAGCAGTATACTACTGGACGACAAATATGAAGTCCGGTTAGGGAGTTTAAGTGAAGCCTGTGCTCAAGAAGGTGATATTCATCAAAGTAAAATCACCCGGTTTCTGCGGTTGCCTCAGTCCTCTGAGCAGGGTACATTTGGTTCATCAACATCAATTTGTGCCTATGACGTTTATTGCTTTGGAAAAGTCTTACTGGAGCTGGTGACGGGTAAGCTGGGAATGAGTGCAGCCAGTGATGCCGAAGTAAAGGAATGGTTTGATCACATTCTACCTTGCATTAGTATGTATGACAAGCAGCTTGTGACAAAAATTGTTGATCCGTCAATGGTTGTTGATGAGGATTTCTTAGAGGAAGTATGGGCTATAGCCATTGTTGCCAGGTCTTGCCTAAATCCCAAACCTTCAAGAAGACCCCCAATGAGATATGTTCTCAAGGCTCTGGAAAACCCTTTAAAAGTTGTGAGGGAAGAAAGTTCCAGTTCTGCACGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACTTTGTTTGGTAGTTGGCGTCAGAGTTCTTCCGATGTAACAGCTACTCCAGCAGCCCCTGGTACAAAACTAGAAAGAGTTAGCAGTTTAAAGCTGTCAGGAACTACCGGTTCACAGTCACAGGGTAGTTTCCACAATGGTGGAGGTGAGATTTCGTCATCGCGGAGACGACATTCAAAGGAGATATTCCCAGAACCATCTGGCGTACATGATGTAGAGAGGTTGGAGCTTGAATAG 2730 0.4538 MGLVWFGFFFLLVLLSQVKVTLEQQQQIEPLSSAEERESLLELRASLGLRSKEWPRKPDPCLIWTGITCQNGRVVGINISGFRRTRLGRRNPQFAVDPLANFTLLHTFNASNFLLPGPIPDWFGISLPSLRVLDLRSCSIVNAIPSTLGNLTNLTTLYLSDNNLTGNVPQALGQLLALSVLDLSRNSLTGSIPTSFAFLANLSSLDMSANFLLGLIPTGIGTLSRLQYLNLSNNGLASLPAQLGGLASLVDLDLSQNSFAGGGLPQDLTGLRNLKRVILANSMLTGVLPGGLFSGSLQLQFLVLRQNNFSGSLPAELWSLPRLSFLDVSANNFSGLLPNSSSAANNATVAVLNISHNKFYGGLTPVFRRFGFVDLSSNYFEGKVLDFMHNVSLDINCLQNATNQKSAVECASFYEERGLSFDNFGHPNMTKPPFSGSSGKSNKTKIILAAVLGGVGLIALLVLLLVLLFLCARKRGNSNQRGNGVGPAPVGSSPPNPGVPVDFPNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLESGIPVVIKRIDMRSTKKEAYLLEMDFFNKVSHQRFVPLLGHCLENENEKFLVYKHMPNGDLSNCLYYKNTTSEDGTLQSLDWITRLKIATGAAEALSYLHHECVPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGDIHQSKITRFLRLPQSSEQGTFGSSTSICAYDVYCFGKVLLELVTGKLGMSAASDAEVKEWFDHILPCISMYDKQLVTKIVDPSMVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSSSARLRATSSRGSWNATLFGSWRQSSSDVTATPAAPGTKLERVSSLKLSGTTGSQSQGSFHNGGGEISSSRRRHSKEIFPEPSGVHDVERLELE 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0114 909 MobiDBLite consensus disorder prediction 882 909 - -
Aed9g0114 909 Pfam Leucine rich repeat 272 333 IPR001611 GO:0005515
Aed9g0114 909 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Aed9g0114 909 Pfam Leucine rich repeat 201 258 IPR001611 GO:0005515
Aed9g0114 909 Gene3D Transferase(Phosphotransferase) domain 1 598 825 - -
Aed9g0114 909 MobiDBLite consensus disorder prediction 842 909 - -
Aed9g0114 909 Coils Coil 905 909 - -
Aed9g0114 909 Gene3D Ribonuclease Inhibitor 294 410 IPR032675 -
Aed9g0114 909 Gene3D Ribonuclease Inhibitor 33 194 IPR032675 -
Aed9g0114 909 Gene3D Ribonuclease Inhibitor 195 293 IPR032675 -
Aed9g0114 909 Pfam Protein tyrosine and serine/threonine kinase 528 800 IPR001245 GO:0004672|GO:0006468
Aed9g0114 909 SUPERFAMILY Protein kinase-like (PK-like) 496 803 IPR011009 -
Aed9g0114 909 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Aed9g0114 909 Gene3D Phosphorylase Kinase; domain 1 502 597 - -
Aed9g0114 909 PANTHER BNAA07G03560D PROTEIN 9 190 - -
Aed9g0114 909 PANTHER BNAA07G03560D PROTEIN 188 852 - -
Aed9g0114 909 SMART LRR_typ_2 223 246 IPR003591 -
Aed9g0114 909 SMART LRR_typ_2 320 343 IPR003591 -
Aed9g0114 909 SMART LRR_typ_2 127 150 IPR003591 -
Aed9g0114 909 SMART LRR_typ_2 151 174 IPR003591 -
Aed9g0114 909 SMART LRR_typ_2 271 295 IPR003591 -
Aed9g0114 909 SMART LRR_typ_2 175 198 IPR003591 -
Aed9g0114 909 PRINTS Leucine-rich repeat signature 223 236 - -
Aed9g0114 909 PRINTS Leucine-rich repeat signature 178 191 - -
Aed9g0114 909 PANTHER RECEPTOR-LIKE PROTEIN 55 9 190 - -
Aed9g0114 909 PANTHER RECEPTOR-LIKE PROTEIN 55 188 852 - -
Aed9g0114 909 ProSiteProfiles Leucine-rich repeat profile. 225 247 IPR001611 GO:0005515
Aed9g0114 909 SUPERFAMILY L domain-like 63 421 - -
Aed9g0114 909 MobiDBLite consensus disorder prediction 859 881 - -
Aed9g0114 909 ProSiteProfiles Protein kinase domain profile. 522 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0114 Aed-Chr9 802521 808821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0114 32 695 Miscellaneous Gene Families AT2G16250 57.675 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Aed9g0114 PK_Tyr_Ser-Thr 9.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0114 - - gmx:100805769 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0114 9 802521 808821 Aed9g0114 9 802521 808821 ECH