Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0110 ATGTTGCACTGTGCGAACATGAACACGAACACGTCGGGGAGGGACATGACAGTGTTGGAAAGACAGAGGGCGAGGATGAAGTGGCAAGATGAGGAAGGGTTCTTTTCTGGAAATAGCTTCAACGGTGTTTTTTCTTCTTCTTCTTCTTCTTCTCTGCACGTTCAAGATTCCATTATGGTAGCTGCTGATTCCGGTTGTGCACTTGCTGAGGTGGTGGCTCAGGCTCAGGCTCAGGCTCAGCCTCCTTCAATGAATGGGCTTGATGCCAATTCTTCTTCAATTTCAAGGACTTTTAGTTGTCCACCTACTCTGGTGGAGTCCAAGCCCAAGCCCAAACCCAAGCTCACTGACTCCTCAATTGGGAAAGACGGCTTCAAGAAGAGGAAACCTGACAAGCTTCACAATCCCAAGGTTAGAAGGGAGAAAATCAGTGAGAGAATGAAGTATTTGCAAGATCTAGTACCCGGTTGCAACAAAATCACAGGAAAAGCTGGAATGCTCGATGAAATCATCAACTATGTTCAATCTCTTCAACGACAAGTTGAGTTTCTCTCAATGAAATTAGCTACTGTGAACCCAAGGCTTGACTTCAGTATTGATGATCTATTTGAAAAAGAGGTGTTTCCCAGTTGTGCTGCAAATTTTCCAAACATTGGAGGAATGTCATCAGACATGACTAACCCTTCCTATCTTCAGTTTAATTCACCACAACAATTATTTTCATATGACCCTTCCGATATGGGGCGTAGAAGGACCATAAGTGCCCCTGTATCAATGCCTGAAACATATCTTCTTCAATCGTCTAGTTTGACACAAATGCTACCCTCCTCAACATGGGAAGGTGATTTCCAAAACCTTTGCAATTTTGAATTTGATCAAGCACGAGCGGCATCTTTTCCTTCTCAGCTGTTATCAGGTCTGGTTGAAGCTGGCAATCTAAAGATGGAGATGTAG 954 0.4382 MLHCANMNTNTSGRDMTVLERQRARMKWQDEEGFFSGNSFNGVFSSSSSSSLHVQDSIMVAADSGCALAEVVAQAQAQAQPPSMNGLDANSSSISRTFSCPPTLVESKPKPKPKLTDSSIGKDGFKKRKPDKLHNPKVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFSIDDLFEKEVFPSCAANFPNIGGMSSDMTNPSYLQFNSPQQLFSYDPSDMGRRRTISAPVSMPETYLLQSSSLTQMLPSSTWEGDFQNLCNFEFDQARAASFPSQLLSGLVEAGNLKMEM 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0110 317 MobiDBLite consensus disorder prediction 110 137 - -
Aed9g0110 317 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 137 297 - -
Aed9g0110 317 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 15 135 - -
Aed9g0110 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 196 IPR036638 GO:0046983
Aed9g0110 317 MobiDBLite consensus disorder prediction 79 102 - -
Aed9g0110 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 177 IPR011598 GO:0046983
Aed9g0110 317 SMART finulus 133 183 IPR011598 GO:0046983
Aed9g0110 317 MobiDBLite consensus disorder prediction 79 137 - -
Aed9g0110 317 Gene3D - 127 197 IPR036638 GO:0046983
Aed9g0110 317 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 137 297 IPR024097 GO:0006355
Aed9g0110 317 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 15 135 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0110 Aed-Chr9 775749 778271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0110 15 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 36.149 1.90e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed9g0110 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0110 - - gmx:100819517 394.43