Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0090 ATGGCAACTTACTACACAAGTTCAAGTAATGAAAGGGATGCAGTGCCTATGTTGTGTCTTAGGGAACCTTTGCCTAATTCATATCCCGAGACACCAATTTTGCCAAGCAATATGACATTGTATATGAACTCTGGATCATATTCAGAAGAATTGTCTGGCAATTCTGAGCAGCAAAACAATTGCTTTGTGATTCCATCACCATCAGTAGGTGCTTCACATTCCACTCCTGAACAGCAAGAAATCTTGGCCAGTATTGGTGGGTTCCAAACTGCGGTTCACGATTTCAGTGCATGGAGGGAGGGTAGAAGTGAGATGTTGGTCAGGCAACCTATGGATGGACAGAACTTACAAGGTCATGGATTATCTCTCAGCCTCGGAACCAACATAGCCTCAGGAATTCAAATGCCTTCTATTCATGATAGGAATCATAGTTCAAGTTTTGATTCATTTTTGGGTACTAATCCATCAATTTCGGGAAATGAGGCCTACCAAAATGGTTCATCTAGAGATGAGGGAATGAGACATTCTGAAAATCTTCCACCTGGCTTACCTGAAGCTAATCAAGATTTGAACAAAGCGGATTTTTCATTTCATGGAATGTCTAGTGTTGGAAGCACAGGTCCTAGCTCCAAATACCTCAAGGTAGTGCAACAACTACTTGATGAAGTTGTTGACATCCGAACAGCTATTAAAAGACCTGCTATGAGAAGTCATAGCACACATGAGAACTCTAAGAAGAATTCTGAGGAGGAGGATGAGCAACTAGAAAATGACATGCCCTCTGCAAATGGAGTGCCTAATTCTCAAGCTTCAGCTAGTAAGACTTCTTGTGGTGAGCCTTCACATGCTGAAAAACAAGATCTGCACCACAAGTTAACAAAGCTTTTGTCGATGTTGGATGAGGTTGACAATAGGTACAAACAATATTATCAGCATATGCAGATTGTGGTGTCATCGTTTGATGAGATAGCAGGATGTGGAGCAGCCAAACCATACACAGCCCTTGCTCTTCAAACCATTTCATGCCATTTTCGGTGTTTGCGTGATGCAATCACCGGTCAAATCAGTGTAACACAAAAGAACCTTGGAGAGCAAGATGGTTCTGGAAGTAACAAAGGAGTTGGAATGGCAAGACTAAAGTATGTGGACCAACAAATCCGTCAACAGAGGGTTCTTCAGCAGCTTGGAATGATGCAAAATGCATGGAGACCACAAAGGGGCCTTCCAGAAAGCTCTGTTTCAATTCTCCGCGCTTGGCTTTTTGAGCATTTCCTTCATCCCTATCCAAAGGATTCTGATAAGACCATGCTAGCAAGACAGACAGGCTTGACCAGAAGTCAGGTATCAAATTGGTTTATAAATGCTCGAGTGCAAATCATGGCATCCACTGGATTAGTGAGTCCAAATTTGGATGATTGTGGTGGTCTCTTGCTCTCTAATGACACAGTTGTTGAGTCTAATGAGAGGTTAGTGGCAGTTGGTCCAACATGCCAAATATCAGAGTTTGAGAGGATCAAGTCAGGAAGTGGAGTGTCTCTTACATTGGGTTTGCAGCATTGTGAAGGAGGTCATTTTTTGCCTGCTGGTGATCAGACCCATCTGAGGGAGGAGGACGACATCTACAACAGGCGCGGCTGGAAGACAACAGAACTTAACTTGAGTGCTGGAAACCAGCGACAAAGACTCAATTCAGCTCATATGTTACATGATGATAGTTTGTTGCAATCATTCTGTGGTTTAAAGTGGGGAAGGAAAAGGAGTGAAGGAAACATGTATATTTGGGTCTATCCTTGCATCATATTCATTGATGAGATCGATGCCATTGCTGGACGACGTGCTGTTAGATTTGAGGGCATTACAGCGACCATCACGGAGCTGCATAACCAGCTTGATGGATTTGATCAGCTTGGAAAGGTCAAAGTGATTATGGCTACAAATAGGCCTGGTGTTCTTGATCCAGCCATTCTTCGCCAAGGTCGAATTGATAAGAAAATTGAAGTTCCATTGCCAAATGAGCACTCAAGGATGGAAATCCTCAAAGTCCATGCTGCTGGAATTGCGAAACATGGTGAAATTGACTATGAAGTAGTTGCTAAGCTTTCTGAGGTGGAGAAGGAGAAGGAGAACGTAGTTGAAGGCACAAGAGTTACCCTGGATAGGAATACGCTGTCCATTATGAGAACCCTTCCGCCCCAAGTTGACCCTTTTGTGTATAATATGCTTCATGAAGATCCCCTAAATGCTAATTATTCTGCACTTAGGGACCTTACAGAACAGATTCAAAAATCCAGGAACTCCATGATTAATCTGCCTCCTGAGCTTAATCTCAAGGTTAACTATGTTGTGAATAATATAATGGAACTTGAAGGGGACCCACAACATGTTAATTATGCTGCAGTTGGAGGGCTTTCAGATCAGATTCGAGAACTCAGGATATTGATTGAATTGTCTTTAACGAATCCTGAGATTTTTTTCAGGGTTGGAATCAATCTCCCCAAAGGTGTTCTTCTTTATGGACCTCCTGGAAATGGGAAGACATTATTAGCAAAAGCAATTTACTGCAACGTAGATGCTAAATTCTTGAAGGTTGCATCTAGTACTATAATTGATAAATCTATCGGTGAAAGTGCAAGATTAATTAAGGAAATGTTTGGATATGCCCGCAATCATCAGGTCAAAGTAATTATGGCTACAAATAGGAGTGATGTTCTTGACCCAGCTCTTCTTGGCCTGGGTCGAATTGATCGGGAAATTGAAATTCCATTACCAAATGGGAACTCAAGGATGCAAATCCTCAAAATCCATGCTGAAGGAATTACGAAAAGTGGTGAAATTGACTATGAAGTACTTGTTAAGCTTTCCGAGACTGATGCGATATACATAACAATTAATTGA 2895 0.4187 MATYYTSSSNERDAVPMLCLREPLPNSYPETPILPSNMTLYMNSGSYSEELSGNSEQQNNCFVIPSPSVGASHSTPEQQEILASIGGFQTAVHDFSAWREGRSEMLVRQPMDGQNLQGHGLSLSLGTNIASGIQMPSIHDRNHSSSFDSFLGTNPSISGNEAYQNGSSRDEGMRHSENLPPGLPEANQDLNKADFSFHGMSSVGSTGPSSKYLKVVQQLLDEVVDIRTAIKRPAMRSHSTHENSKKNSEEEDEQLENDMPSANGVPNSQASASKTSCGEPSHAEKQDLHHKLTKLLSMLDEVDNRYKQYYQHMQIVVSSFDEIAGCGAAKPYTALALQTISCHFRCLRDAITGQISVTQKNLGEQDGSGSNKGVGMARLKYVDQQIRQQRVLQQLGMMQNAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSDKTMLARQTGLTRSQVSNWFINARVQIMASTGLVSPNLDDCGGLLLSNDTVVESNERLVAVGPTCQISEFERIKSGSGVSLTLGLQHCEGGHFLPAGDQTHLREEDDIYNRRGWKTTELNLSAGNQRQRLNSAHMLHDDSLLQSFCGLKWGRKRSEGNMYIWVYPCIIFIDEIDAIAGRRAVRFEGITATITELHNQLDGFDQLGKVKVIMATNRPGVLDPAILRQGRIDKKIEVPLPNEHSRMEILKVHAAGIAKHGEIDYEVVAKLSEVEKEKENVVEGTRVTLDRNTLSIMRTLPPQVDPFVYNMLHEDPLNANYSALRDLTEQIQKSRNSMINLPPELNLKVNYVVNNIMELEGDPQHVNYAAVGGLSDQIRELRILIELSLTNPEIFFRVGINLPKGVLLYGPPGNGKTLLAKAIYCNVDAKFLKVASSTIIDKSIGESARLIKEMFGYARNHQVKVIMATNRSDVLDPALLGLGRIDREIEIPLPNGNSRMQILKIHAEGITKSGEIDYEVLVKLSETDAIYITIN 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0090 964 Pfam ATPase family associated with various cellular activities (AAA) 596 669 IPR003959 GO:0005524|GO:0016887
Aed9g0090 964 Pfam ATPase family associated with various cellular activities (AAA) 835 890 IPR003959 GO:0005524|GO:0016887
Aed9g0090 964 Gene3D - 687 744 IPR012340 -
Aed9g0090 964 Gene3D - 923 955 - -
Aed9g0090 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 796 956 IPR027417 -
Aed9g0090 964 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Aed9g0090 964 SUPERFAMILY Homeodomain-like 403 460 IPR009057 -
Aed9g0090 964 Pfam Associated with HOX 209 352 IPR006563 -
Aed9g0090 964 MobiDBLite consensus disorder prediction 231 252 - -
Aed9g0090 964 Pfam Homeobox KN domain 419 456 IPR008422 GO:0003677|GO:0006355
Aed9g0090 964 MobiDBLite consensus disorder prediction 149 167 - -
Aed9g0090 964 MobiDBLite consensus disorder prediction 231 286 - -
Aed9g0090 964 Gene3D - 585 686 IPR027417 -
Aed9g0090 964 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 77 458 - -
Aed9g0090 964 Coils Coil 238 258 - -
Aed9g0090 964 CDD homeodomain 402 456 IPR001356 GO:0003677
Aed9g0090 964 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 77 458 - -
Aed9g0090 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 595 702 IPR027417 -
Aed9g0090 964 SMART HOX_1 402 466 IPR001356 GO:0003677
Aed9g0090 964 Gene3D - 408 464 - -
Aed9g0090 964 Gene3D - 794 892 IPR027417 -
Aed9g0090 964 MobiDBLite consensus disorder prediction 149 189 - -
Aed9g0090 964 CDD AAA 805 922 - -
Aed9g0090 964 MobiDBLite consensus disorder prediction 260 279 - -
Aed9g0090 964 Gene3D - 893 922 IPR027417 -
Aed9g0090 964 SMART prehox3 201 353 IPR006563 -
Aed9g0090 964 CDD AAA 597 669 - -
Aed9g0090 964 ProSitePatterns AAA-protein family signature. 639 657 IPR003960 GO:0005524|GO:0016887
Aed9g0090 964 SMART AAA_5 831 924 IPR003593 -
Aed9g0090 964 SMART AAA_5 501 671 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0090 Aed-Chr9 656564 675460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0090 27 570 Homeobox Transcription Factor Family AT4G34610 39.669 3.25e-103 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aed9g0090 POX 2.5e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0090 - - gmx:100816667 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0090 9 656564 675460 Aed9g0090 9 656564 675460 ECH