Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g0068 ATGGCTTCATCTATATCTAATCTCTCAACCCTCTCCAAACCCTCCTCTTTCCCTTTCCGCAACAACAAAAACAACAACAACAACAACAACGCTTCTTTTCTTCTCAACAACCACAAGAACTACTCCGCCCAGAAACTGAAACTCTCTTCCCCTCTGCCTCTCGCATGCAACACTAAACACCAAAACAGTAATTTGTTGGACGAAAACGAGGAGAAGCCTCGCGAAGAGTGCGGAGTGGTGGGCATCTACGGCGACCCCGAAGCCTCCCGTCTTTGCTTCCTTGCCCTCCACGCCCTCCAGCACCGTGGCCAGGAAGGCGCCGGCATCGTCGCCGTCCACGAAAACATCCTCCAGTCAATAACCGGCGTCGGCCTCGTCTCCGAAGTCTTCGACGAGTCCAAGCTCTCCAGCCTGCCGGGCACCTCCGCCATTGGGCACGTCCGCTACTCCACCGCCGGGCAATCCATGCTCAACAACGTCCAACCCTTCGTGGCTGGGTACCGGTTCGGGTCCGTGGGCGTGGCCCACAACGGCAACTTCGTGAATTACCGGTCCCTGAGAAGCAAACTGGAAGAAAACGGGTCCATCTTCAATACCACCTCGGACACGGAGGTAGTCCTCCACCTGATCGCCACCTCAAAACACAGAACCTTCCTCCTGAGAATCGTTGACGCCTGCGAGCATCTAAAAGGCGCCTACTCACTTGTGTTCGTGACCGAAGACAAGCTGGTCGCCGTCAGAGACCCCTTCGGGTTCCGTCCCTTGGTGATGGGAAGGAGAGCCAACGGCGCAGTCGTTTTCGCCTCTGAGACATGCGCCCTCGACTTGATAGAAGCGACGTACGAGAGAGAGGTGCACCCTGGCGAGGTCATCGTTGTGGACCCCACCGGAATCCAATCCCTCTGCCTTGTCTCCCATCCCTCCGAACCAAAGCAATGCATCTTCGAGCACATATACTTCGCGCTTCCCAACTCCGTTGTGTTCGGGAGGTCCGTTTACGAGTCTAGATACAAATTCGGAGAAATATTGGCGACGGAAAGCCCCGTTGAGTGCGACGTAGTGATCGCTGTTCCTGATTCTGGTGTGGTGGCTGCACTTGGCTACGCAGCAAAAGCTGGGGTCCCCTTCCAGCAGGGGCTCATAAGGTCACACTACGTGGGGAGGACATTCATCGAACCTTCGCAGAAAATAAGGGATTTTGGAGTGAAGCTGAAGCTGTCTCCGGTTCGGGGTGTGCTTGAAGGGAAGAGGATTGTGGTTGTGGATGATTCCATTGTTAGAGGAACGACGTCGTCGAAGATAGTGAGGCTATTGAAGGATGCTGGTGCTAAGGAAGTTCACATGAGGATTGCGTGTCCTCCCATTGTTGGGTCGTGTTATTATGGAGTGGACACTCCCAGCTCTCAGGAGTTGATATCGAACAGGATGAGTGTCGAGGAGATTAGGGATTTCATTGGCTCTGATTCTCTCGCTTTTCTTCCCTTGGATAACCTCAAGCTGTCACTCGGGGATGCCAATAACTACTGCTATGCGTGCTTCTCCGGGAAGTACCCTGTTGAGCCCGAGGAACTTCAAATCAACAAGACTACCCTTGCTGTTGATCACTTTAATTGGGATGGCCTTAAGATTGCCAGTGTCTGA 1641 0.5369 MASSISNLSTLSKPSSFPFRNNKNNNNNNNASFLLNNHKNYSAQKLKLSSPLPLACNTKHQNSNLLDENEEKPREECGVVGIYGDPEASRLCFLALHALQHRGQEGAGIVAVHENILQSITGVGLVSEVFDESKLSSLPGTSAIGHVRYSTAGQSMLNNVQPFVAGYRFGSVGVAHNGNFVNYRSLRSKLEENGSIFNTTSDTEVVLHLIATSKHRTFLLRIVDACEHLKGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRANGAVVFASETCALDLIEATYEREVHPGEVIVVDPTGIQSLCLVSHPSEPKQCIFEHIYFALPNSVVFGRSVYESRYKFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRIVVVDDSIVRGTTSSKIVRLLKDAGAKEVHMRIACPPIVGSCYYGVDTPSSQELISNRMSVEEIRDFIGSDSLAFLPLDNLKLSLGDANNYCYACFSGKYPVEPEELQINKTTLAVDHFNWDGLKIASV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g0068 546 Pfam Phosphoribosyl transferase domain 348 448 IPR000836 -
Aed9g0068 546 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 28 533 - -
Aed9g0068 546 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 77 296 IPR017932 -
Aed9g0068 546 Hamap Amidophosphoribosyltransferase [purF]. 76 517 IPR005854 GO:0004044|GO:0009113
Aed9g0068 546 PIRSF Pur1 73 532 IPR005854 GO:0004044|GO:0009113
Aed9g0068 546 CDD PRTases_typeI 340 451 IPR000836 -
Aed9g0068 546 Pfam Glutamine amidotransferase domain 155 274 IPR017932 -
Aed9g0068 546 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 77 299 IPR029055 -
Aed9g0068 546 Gene3D - 337 501 IPR029057 -
Aed9g0068 546 CDD GPATase_N 77 328 IPR035584 -
Aed9g0068 546 TIGRFAM purF: amidophosphoribosyltransferase 77 518 IPR005854 GO:0004044|GO:0009113
Aed9g0068 546 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 28 533 - -
Aed9g0068 546 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 77 518 IPR029055 -
Aed9g0068 546 SUPERFAMILY PRTase-like 313 523 IPR029057 -
Aed9g0068 546 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g0068 Aed-Chr9 477654 479294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g0068 67 528 PRT Gene Family AT2G16570 82.974 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g0068 K00764 - gmx:548065 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g0068 9 477654 479294 Aed9g0068 9 477654 479294 ECH